contig_metadata
5 rows where bioproject = "PRJEB80557", tax_kingdom = "Pseudomonadati" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 996474 | 996474 | PRJEB80557_S_NODE_16621_length_230_cov_8.248619_g16225_i0 | PRJEB80557 | 16621 | 230 | 8.248619 | 18.9718237 | Borrelia | 138 | Bacteria | Bacteria | 52.8 | 0.021 | NTclustered | gi|2668652688|gb|CP129313.1| | 142 | g16225 | i0 | 100 | 0.243478260869565 | 28 | 0 | 12 | 0 | 168 | 195 | 11682 | 11655 | Borrelia turicatae strain BTCAM1 plasmid lp32, complete sequence | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Borreliaceae | Borrelia | Borrelia turicatae | ||
| 27918606 | 27918606 | PRJEB80557_S_NODE_24425_length_194_cov_1.662069_g24029_i0 | PRJEB80557 | 24425 | 194 | 1.662069 | 3.22441386 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 77 | 1.02e-14 | NR | HRV29573.1 | 2053615 | g24029 | i0 | 72 | 2.31958762886598 | 50 | 14 | 77.3 | 0 | 151 | 2 | 82 | 131 | HRV29573.1 hypothetical protein [Spirochaetia bacterium] | diamond | 450 | 77 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 29213465 | 29213465 | PRJEB80557_S_NODE_24889_length_193_cov_1.076389_g24493_i0 | PRJEB80557 | 24889 | 193 | 1.076389 | 2.07743077 | Spirochaetia bacterium | 2053615 | Bacteria | Bacteria | 117 | 1.19e-29 | NR | HRV28903.1 | 2053615 | g24493 | i0 | 87.1 | 2.82901554404145 | 62 | 8 | 96.4 | 0 | 7 | 192 | 244 | 305 | HRV28903.1 recombinase RecT [Spirochaetia bacterium] | diamond | 546 | 117 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetia bacterium | |||||
| 29939668 | 29939668 | PRJEB80557_S_NODE_7251_length_330_cov_2.729537_g6855_i0 | PRJEB80557 | 7251 | 330 | 2.729537 | 9.0074721 | Treponema ruminis | 744515 | Bacteria | Bacteria | 49.3 | 9.36e-5 | NR | WP_206173080.1 | 744515 | g6855 | i0 | 34.9 | 0.754545454545455 | 83 | 50 | 73.6 | 2 | 2 | 244 | 14 | 94 | WP_206173080.1 single-stranded DNA-binding protein [Treponema ruminis] | diamond | 249 | 49.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema ruminis | ||
| 30255753 | 30255753 | PRJEB80557_S_NODE_23332_length_198_cov_1.389262_g22936_i0 | PRJEB80557 | 23332 | 198 | 1.389262 | 2.75073876 | Pleomorphochaeta sp. | 1920505 | Bacteria | Bacteria | 73.9 | 6.03e-14 | NR | MDC7243806.1 | 1920505 | g22936 | i0 | 59.6 | 0.863636363636364 | 57 | 23 | 86.4 | 0 | 28 | 198 | 1 | 57 | MDC7243806.1 Fe-S cluster assembly ATPase SufC [Pleomorphochaeta sp.] | diamond | 171 | 73.9 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Pleomorphochaeta | Pleomorphochaeta sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;