contig_metadata
8 rows where bioproject = "PRJEB80557", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 996556 | 996556 | PRJEB80557_S_NODE_34161_length_167_cov_1.237288_g33765_i0 | PRJEB80557 | 34161 | 167 | 1.237288 | 2.06627096 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 103 | 4.77e-24 | NR | MEE2779060.1 | 2818507 | g33765 | i0 | 83.6 | 0.988023952095808 | 55 | 9 | 98.8 | 0 | 166 | 2 | 141 | 195 | MEE2779060.1 aldehyde dehydrogenase family protein [Myxococcota bacterium] | diamond | 165 | 103 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 5241863 | 5241863 | PRJEB80557_S_NODE_9045_length_302_cov_1.367589_g8649_i0 | PRJEB80557 | 9045 | 302 | 1.367589 | 4.13011878 | Anaeromyxobacter paludicola | 2918171 | Bacteria | Bacteria | 414 | 3.11e-111 | NTclustered | gi|2199271117|dbj|AP025592.1| | 2918171 | g8649 | i0 | 93.238 | 212.94701986755 | 281 | 19 | 93 | 0 | 1 | 281 | 1383143 | 1383423 | Anaeromyxobacter paludicola DNA, complete genome | blastn | 64310 | 414 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter paludicola | ||
| 7374078 | 7374078 | PRJEB80557_S_NODE_24526_length_194_cov_1.075862_g24130_i0 | PRJEB80557 | 24526 | 194 | 1.075862 | 2.08717228 | Myxococcus | 32 | Bacteria | Bacteria | 298 | 1.95e-76 | NTclustered | gi|2869653495|gb|CP175551.1| | 33 | g24130 | i0 | 97.159 | 2.72164948453608 | 176 | 5 | 91 | 0 | 19 | 194 | 5282724 | 5282549 | Myxococcus fulvus strain KYC1117 chromosome, complete genome | blastn | 528 | 298 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus fulvus | ||
| 23090946 | 23090946 | PRJEB80557_S_NODE_11939_length_267_cov_1.756881_g11543_i0 | PRJEB80557 | 11939 | 267 | 1.756881 | 4.69087227 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 152 | 3.24e-41 | NR | MBI2392224.1 | 2026735 | g11543 | i0 | 84.1 | 0.98876404494382 | 88 | 14 | 98.9 | 0 | 266 | 3 | 348 | 435 | MBI2392224.1 slipin family protein [Deltaproteobacteria bacterium] | diamond | 264 | 152 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 27413776 | 27413776 | PRJEB80557_S_NODE_13603_length_252_cov_2.325123_g13207_i0 | PRJEB80557 | 13603 | 252 | 2.325123 | 5.85930996 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 99.8 | 8.98e-25 | NR | RLA97446.1 | 2026735 | g13207 | i0 | 62.8 | 1.9047619047619 | 78 | 29 | 92.9 | 0 | 12 | 245 | 51 | 128 | RLA97446.1 MAG: methylmalonyl-CoA mutase [Deltaproteobacteria bacterium] | diamond | 480 | 99.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30729344 | 30729344 | PRJEB80557_S_NODE_33854_length_167_cov_2.567797_g33458_i0 | PRJEB80557 | 33854 | 167 | 2.567797 | 4.28822099 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 50.8 | 1.84e-5 | NR | MBI2392715.1 | 2026735 | g33458 | i0 | 77.4 | 0.55688622754491 | 31 | 7 | 55.7 | 0 | 2 | 94 | 411 | 441 | MBI2392715.1 sigma 54-interacting transcriptional regulator [Deltaproteobacteria bacterium] | diamond | 93 | 50.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 32215637 | 32215637 | PRJEB80557_S_NODE_10178_length_287_cov_1.193277_g9782_i0 | PRJEB80557 | 10178 | 287 | 1.193277 | 3.42470499 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 48.1 | 4.76e-4 | NR | MBM4273174.1 | 2026735 | g9782 | i0 | 47.7 | 0.45993031358885 | 44 | 23 | 46 | 0 | 223 | 92 | 14 | 57 | MBM4273174.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 132 | 48.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 32342367 | 32342367 | PRJEB80557_S_NODE_9459_length_296_cov_1.465587_g9063_i0 | PRJEB80557 | 9459 | 296 | 1.465587 | 4.33813752 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 57.8 | 3.7e-7 | NR | QQR79486.1 | 2026735 | g9063 | i0 | 51.4 | 1.43918918918919 | 72 | 23 | 61.8 | 4 | 33 | 215 | 688 | 758 | QQR79486.1 MAG: efflux RND transporter permease subunit [Deltaproteobacteria bacterium] | diamond | 426 | 57.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;