RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB80557", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJEB80557 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29654855 29654855 PRJEB80557_S_NODE_17070_length_228_cov_1.530726_g16674_i0 PRJEB80557 17070 228 1.530726 3.49005528 Candidatus Methanomethylophilaceae archaeon 2517205 Archaea Archaea 42.4 0.042   NR HKM09363.1 2517205 g16674 i0 39.7 0.828947368421053 63 30 72.4 2 7 171 144 206 HKM09363.1 ABC transporter substrate-binding protein [Candidatus Methanomethylophilaceae archaeon] diamond 189 42.4 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomethylophilaceae   Candidatus Methanomethylophilaceae archaeon
32088969 32088969 PRJEB80557_S_NODE_24158_length_195_cov_1.417808_g23762_i0 PRJEB80557 24158 195 1.417808 2.7647256 Thermoplasmatota archaeon 2806419 Archaea Archaea 43.9 0.00757   NR HWH08950.1 2806419 g23762 i0 33.3 0.969230769230769 63 34 84.6 1 20 184 228 290 HWH08950.1 hypothetical protein [Thermoplasmatota archaeon] diamond 189 43.9 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;