RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB80557", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJEB80557 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8649636 8649636 PRJEB80557_S_NODE_10307_length_285_cov_1.745763_g9911_i0 PRJEB80557 10307 285 1.745763 4.97542455 Bacteria 2 Bacteria Bacteria 200 8.879999999999999e-47   NTclustered gi|2126063867|gb|CP085689.1| 2886196 g9911 i0 87.719 315.263157894737 171 21 60 0 38 208 2382991 2382821 Lentisphaerae bacterium WC36 chromosome, complete genome blastn 89850 200 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium WC36
28606036 28606036 PRJEB80557_S_NODE_17987_length_223_cov_1.091954_g17591_i0 PRJEB80557 17987 223 1.091954 2.43505742 Pseudomonadati 3379134 Bacteria Bacteria 52.4 1.08e-5   NR OGV65628.1 1798582 g17591 i0 81.3 3.44394618834081 32 6 43 0 212 117 335 366 OGV65628.1 MAG: sugar kinase [Lentisphaerae bacterium RIFOXYC12_FULL_60_16] diamond 768 52.4 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerae bacterium RIFOXYC12_FULL_60_16

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;