RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB80557" and tax_clade = "Discoba"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJEB80557 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7374161 7374161 PRJEB80557_S_NODE_8966_length_303_cov_1.551181_g8570_i0 PRJEB80557 8966 303 1.551181 4.70007843 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 63.9 1.3e-5   NTclustered gi|2719226838|gb|PP695237.1| 51637 g8570 i0 100 11.4389438943894 34 0 11 0 207 240 4007 3974 Naegleria lovaniensis strain TS rDNA-containing extrachromosomal element genomic sequence blastn 3466 63.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
32588064 32588064 PRJEB80557_S_NODE_7039_length_334_cov_1.985965_g6643_i0 PRJEB80557 7039 334 1.985965 6.6331231 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 54.3 1.75e-6   NR XP_002676892.1 5762 g6643 i0 39.4 3.47604790419162 66 40 59.3 0 329 132 75 140 XP_002676892.1 uncharacterized protein NAEGRDRAFT_33801, partial [Naegleria gruberi] diamond 1161 54.7 0.992687385740402 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;