RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB7799", tax_phylum = "Peploviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Peploviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJEB7799 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25617050 25617050 PRJEB7799l_S_NODE_3473_length_245_cov_483.785714_g3444_i0 PRJEB7799 3473 245 483.785714 1185.2749993 root 1 Root_unresolved Root_unresolved 69.4 2.2e-7   NTclustered gi|1893169343|gb|MT364888.1| 10310 g3444 i0 100 17.3224489795918 37 0 15 0 2 38 47 83 Human alphaherpesvirus 2, partial genome blastn 4244 69.4 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha2
26207751 26207751 PRJEB7799g_S_NODE_1038_length_255_cov_85.077273_g822_i0 PRJEB7799 1038 255 85.077273 216.94704615 human gammaherpesvirus 4 10376 Viruses Viruses 54.7 0.006   NTclustered gi|1386449979|gb|MG298870.1| 10376 g822 i0 100 0.113725490196078 29 0 11 0 225 253 36318 36346 Human gammaherpesvirus 4 isolate JC_V005, partial genome blastn 29 54.7 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
26345606 26345606 PRJEB7799p_S_NODE_4223_length_247_cov_8804.240566_g4200_i0 PRJEB7799 4223 247 8804.240566 21746.47419802 human gammaherpesvirus 4 10376 Viruses Viruses 130 1e-25   NTclustered gi|1386449979|gb|MG298870.1| 10376 g4200 i0 100 29.2226720647773 70 0 28 0 24 93 36565 36634 Human gammaherpesvirus 4 isolate JC_V005, partial genome blastn 7218 130 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
26569617 26569617 PRJEB7799p_S_NODE_2008_length_319_cov_2961.376761_g1985_i0 PRJEB7799 2008 319 2961.376761 9446.79186759 root 1 Root_unresolved Root_unresolved 124 6.2499999999999996e-24   NTclustered gi|1386449979|gb|MG298870.1| 10376 g1985 i0 98.592 32.8683385579937 71 0 22 1 24 94 36565 36634 Human gammaherpesvirus 4 isolate JC_V005, partial genome blastn 10485 124 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;