contig_metadata
6 rows where bioproject = "PRJEB7799" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25526804 | 25526804 | PRJEB7799d_S_NODE_2497_length_203_cov_1.666667_g2487_i0 | PRJEB7799 | 2497 | 203 | 1.666667 | 3.38333401 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 187 | 4.65e-43 | NTclustered | gi|2874253755|emb|OY969695.1| | 412054 | g2487 | i0 | 85.795 | 16.7832512315271 | 176 | 25 | 87 | 0 | 28 | 203 | 124677 | 124502 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04967.bin.1.34 genome assembly, chromosome: 1 | blastn | 3407 | 187 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 26342734 | 26342734 | PRJEB7799a_S_NODE_6991_length_203_cov_2.851190_g6956_i0 | PRJEB7799 | 6991 | 203 | 2.85119 | 5.7879157 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 71.3 | 4.88e-8 | NTclustered | gi|2108172456|gb|CP070716.1| | 2026742 | g6956 | i0 | 85.507 | 0.339901477832512 | 69 | 8 | 34 | 1 | 5 | 73 | 1728225 | 1728291 | MAG: Gemmatimonadetes bacterium isolate bin486 chromosome | blastn | 69 | 71.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 32964285 | 32964285 | PRJEB7799a_S_NODE_6218_length_210_cov_1.365714_g6183_i0 | PRJEB7799 | 6218 | 210 | 1.365714 | 2.8679994 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 57.4 | 5.55e-8 | NR | HEX2081502.1 | 2029185 | g6183 | i0 | 41.2 | 0.971428571428571 | 68 | 27 | 80 | 2 | 35 | 202 | 117 | 183 | HEX2081502.1 hypothetical protein [Longimicrobium sp.] | diamond | 204 | 57.4 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 33083436 | 33083436 | PRJEB7799a_S_NODE_13382_length_170_cov_1.829630_g13347_i0 | PRJEB7799 | 13382 | 170 | 1.82963 | 3.110371 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 49.3 | 6.67e-5 | NR | HXY31950.1 | 2026741 | g13347 | i0 | 47.9 | 0.847058823529412 | 48 | 25 | 84.7 | 0 | 168 | 25 | 265 | 312 | HXY31950.1 hypothetical protein [Gemmatimonadaceae bacterium] | diamond | 144 | 49.3 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 33084227 | 33084227 | PRJEB7799n_S_NODE_11774_length_155_cov_1.941667_g11737_i0 | PRJEB7799 | 11774 | 155 | 1.941667 | 3.00958385 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 49.7 | 3.95e-5 | NR | MDP1861325.1 | 2026741 | g11737 | i0 | 55.8 | 3.63870967741935 | 43 | 19 | 83.2 | 0 | 155 | 27 | 140 | 182 | MDP1861325.1 glycosyltransferase [Gemmatimonadaceae bacterium] | diamond | 564 | 49.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 33151794 | 33151794 | PRJEB7799a_S_NODE_4120_length_238_cov_8.940887_g4085_i0 | PRJEB7799 | 4120 | 238 | 8.940887 | 21.27931106 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 43.5 | 0.0184 | NR | HMG12470.1 | 2026741 | g4085 | i0 | 40 | 1.51260504201681 | 60 | 32 | 75.6 | 1 | 34 | 213 | 51 | 106 | HMG12470.1 chloride channel protein [Gemmatimonadaceae bacterium] | diamond | 360 | 43.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;