RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJEB7799" and tax_phylum = "Blastocladiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB7799 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25617201 25617201 PRJEB7799n_S_NODE_5817_length_197_cov_1.944444_g5780_i0 PRJEB7799 5817 197 1.944444 3.83055468 Blastocladiaceae 4806 Fungi Fungi 195 2.6799999999999997e-45   NTclustered gi|2440036|emb|X90411.1| 4808 g5780 i0 85.128 66.6548223350254 195 24 97 5 1 191 2154 1961 B.emersonii DNA for 28S ribosomal RNA gene blastn 13131 195 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
25663193 25663193 PRJEB7799g_S_NODE_3938_length_187_cov_1.835526_g3722_i0 PRJEB7799 3938 187 1.835526 3.43243362 Catenaria anguillulae PL171 765915 Fungi Fungi 81.3 1.37e-18   NR ORZ29652.1 765915 g3722 i0 66.7 2.77540106951872 57 19 91.4 0 186 16 10 66 ORZ29652.1 ribosomal protein S28e, partial [Catenaria anguillulae PL171] diamond 519 81.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenaria Catenaria anguillulae
25800358 25800358 PRJEB7799m_S_NODE_1579_length_173_cov_4.333333_g1574_i0 PRJEB7799 1579 173 4.333333 7.49666609 Blastocladiella sp. 2169676 Fungi Fungi 237 3.74e-58   NTclustered gi|1866582625|gb|MT730800.1| 2169676 g1574 i0 91.329 100.335260115607 173 15 100 0 1 173 4170 3998 Blastocladiella sp. isolate JEL0735 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17358 237 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella sp.
25800679 25800679 PRJEB7799n_S_NODE_8227_length_175_cov_21.528571_g8190_i0 PRJEB7799 8227 175 21.528571 37.67499925 Blastocladiella sp. 2169676 Fungi Fungi 235 1.36e-57   NTclustered gi|1866582625|gb|MT730800.1| 2169676 g8190 i0 91.279 98.6228571428571 172 15 98 0 4 175 3999 4170 Blastocladiella sp. isolate JEL0735 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17259 235 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella sp.
26209081 26209081 PRJEB7799n_S_NODE_6054_length_194_cov_4.169811_g6017_i0 PRJEB7799 6054 194 4.169811 8.08943334 Catenophlyctis variabilis 945688 Fungi Fungi 226 9.319999999999998e-55   NTclustered gi|82398236|gb|DQ273780.1| 945688 g6017 i0 89.13 57.1082474226804 184 17 94 3 13 194 2579 2761 Catenophlyctis sp. JEL298 isolate AFTOL-ID 36 28S ribosomal RNA gene, partial sequence blastn 11079 226 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Catenariaceae Catenophlyctis Catenophlyctis variabilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;