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contig_metadata

34 rows where bioproject = "PRJEB7799", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 34 ✖

tax_phylum 1

  • Acidobacteriota · 34 ✖

tax_kingdom 1

bioproject 1

  • PRJEB7799 · 34 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25663851 25663851 PRJEB7799l_S_NODE_3058_length_256_cov_4.542986_g3029_i0 PRJEB7799 3058 256 4.542986 11.63004416 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 300 7.53e-77   NTclustered gi|217038907|gb|EU810998.1| 171953 g3029 i0 88.492 150.0625 252 24 97 4 1 249 106 355 Uncultured Acidobacteria bacterium clone 01QCK 23S ribosomal RNA gene, partial sequence blastn 38416 300 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
25798381 25798381 PRJEB7799a_S_NODE_5523_length_217_cov_4.758242_g5488_i0 PRJEB7799 5523 217 4.758242 10.32538514 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 237 4.93e-58   NTclustered gi|217038907|gb|EU810998.1| 171953 g5488 i0 89.418 130.751152073733 189 19 87 1 25 212 291 103 Uncultured Acidobacteria bacterium clone 01QCK 23S ribosomal RNA gene, partial sequence blastn 28373 237 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
25799347 25799347 PRJEB7799g_S_NODE_8699_length_168_cov_4.751880_g8483_i0 PRJEB7799 8699 168 4.75188 7.9831584 Acidobacteriota bacterium 1978231 Bacteria Bacteria 207 2.85e-49   NTclustered gi|1958093598|gb|CP065003.1| 1978231 g8483 i0 94.737 102.416666666667 133 7 79 0 1 133 317249 317381 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome blastn 17206 207 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
25799955 25799955 PRJEB7799l_S_NODE_2171_length_291_cov_3.785156_g2142_i0 PRJEB7799 2171 291 3.785156 11.01480396 Acidobacteriota bacterium 1978231 Bacteria Bacteria 344 3.97e-90   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g2142 i0 88.014 195.989690721649 292 34 100 1 1 291 3298451 3298160 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 57033 344 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
25934127 25934127 PRJEB7799a_S_NODE_1412_length_339_cov_5.506579_g1377_i0 PRJEB7799 1412 339 5.506579 18.66730281 Acidobacteriota bacterium 1978231 Bacteria Bacteria 388 2.15e-103   NTclustered gi|1958093598|gb|CP065003.1| 1978231 g1377 i0 89.355 90.1356932153392 310 32 91 1 31 339 317558 317249 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome blastn 30556 388 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
25935047 25935047 PRJEB7799c_S_NODE_9204_length_177_cov_1.049296_g9181_i0 PRJEB7799 9204 177 1.049296 1.85725392 Mesoterricola sediminis 2927980 Bacteria Bacteria 91.6 3.17e-14   NTclustered gi|2490895851|dbj|AP027081.1| 2927980 g9181 i0 92.188 4.04519774011299 64 5 36 0 35 98 4454243 4454180 Mesoterricola sediminis W786 DNA, complete genome blastn 716 91.6 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Mesoterricola Mesoterricola sediminis
25935359 25935359 PRJEB7799f_S_NODE_1556_length_216_cov_3.204420_g1540_i0 PRJEB7799 1556 216 3.20442 6.9215472 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 248 2.26e-61   NTclustered gi|2874254027|emb|OY970352.1| 171953 g1540 i0 88.78 8.75 205 20 94 3 1 204 2367131 2366929 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.5 genome assembly, chromosome: 1 blastn 1890 248 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
25935906 25935906 PRJEB7799j_S_NODE_324_length_237_cov_6.009901_g319_i0 PRJEB7799 324 237 6.009901 14.24346537 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 246 9.09e-61   NTclustered gi|2874253677|emb|OY969111.1| 171953 g319 i0 87.727 125.7805907173 220 15 90 11 1 214 716250 716037 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.3 genome assembly, chromosome: 1 blastn 29810 246 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
25936544 25936544 PRJEB7799m_S_NODE_1276_length_184_cov_3.798658_g1271_i0 PRJEB7799 1276 184 3.798658 6.98953072 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 145 2.5199999999999997e-30   NTclustered gi|2874253760|emb|OY969701.1| 2283092 g1271 i0 81.313 4.46739130434783 198 19 99 13 1 183 3176829 3177023 MAG: Pyrinomonadaceae bacterium isolate MFD04212.bin.c.1 genome assembly, chromosome: 1 blastn 822 145 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
26025805 26025805 PRJEB7799q_S_NODE_148_length_427_cov_3.704082_g138_i0 PRJEB7799 148 427 3.704082 15.81643014 Granulicella 940557 Bacteria Bacteria 641 1.92e-179   NTclustered gi|470487846|ref|NR_076839.1| 940615 g138 i0 94.511 181.566744730679 419 17 98 6 11 427 1889 1475 Granulicella tundricola strain MP5ACTX9 23S ribosomal RNA gene, complete sequence blastn 77529 641 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Granulicella Granulicella tundricola
26071843 26071843 PRJEB7799j_S_NODE_1877_length_178_cov_3.909091_g1872_i0 PRJEB7799 1877 178 3.909091 6.95818198 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 204 3.929999999999999e-48   NTclustered gi|112980863|gb|DQ829667.1| 171953 g1872 i0 88.068 211.370786516854 176 16 98 5 5 178 184 12 Uncultured Acidobacteria bacterium clone DON17 23S ribosomal RNA gene, partial sequence blastn 37624 204 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
26071845 26071845 PRJEB7799j_S_NODE_325_length_237_cov_5.178218_g320_i0 PRJEB7799 325 237 5.178218 12.27237666 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 228 3.2899999999999986e-55   NTclustered gi|2874253692|emb|OY969418.1| 171953 g320 i0 84.615 115.392405063291 234 31 98 5 1 233 4233974 4233745 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 27348 228 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
26072820 26072820 PRJEB7799n_S_NODE_8725_length_172_cov_1.102190_g8688_i0 PRJEB7799 8725 172 1.10219 1.8957668 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 107 1.37e-26   NR HNY41858.1 2212468 g8688 i0 96.4 0.959302325581395 55 2 95.9 0 1 165 150 204 HNY41858.1 DNA-directed RNA polymerase subunit alpha [Bryobacteraceae bacterium] diamond 165 107 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
26073385 26073385 PRJEB7799p_S_NODE_25533_length_152_cov_2.042735_g25510_i0 PRJEB7799 25533 152 2.042735 3.1049572 Geothrix oryzae 2927975 Bacteria Bacteria 187 3.27e-43   NTclustered gi|2490888707|dbj|AP027079.1| 2927975 g25510 i0 92.366 81.3421052631579 131 10 86 0 21 151 2087908 2088038 Geothrix oryzae Red222 DNA, complete genome blastn 12364 187 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix oryzae
26206322 26206322 PRJEB7799a_S_NODE_11518_length_177_cov_1.690141_g11483_i0 PRJEB7799 11518 177 1.690141 2.99154957 Geothrix oryzae 2927975 Bacteria Bacteria 189 1.0899999999999999e-43   NTclustered gi|2490888707|dbj|AP027079.1| 2927975 g11483 i0 87.135 85.0790960451977 171 17 94 4 1 167 431841 432010 Geothrix oryzae Red222 DNA, complete genome blastn 15059 189 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix oryzae
26209180 26209180 PRJEB7799o_S_NODE_1782_length_195_cov_2.356250_g1774_i0 PRJEB7799 1782 195 2.35625 4.5946875 Acidobacteriota bacterium 1978231 Bacteria Bacteria 233 5.61e-57   NTclustered gi|1958093598|gb|CP065003.1| 1978231 g1774 i0 88.265 71.2205128205128 196 22 100 1 1 195 317252 317447 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome blastn 13888 233 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
26343857 26343857 PRJEB7799i_S_NODE_8511_length_170_cov_1.185185_g8481_i0 PRJEB7799 8511 170 1.185185 2.0148145 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 62.1 2.36e-5   NTclustered gi|2874254159|emb|OY970389.1| 2283092 g8481 i0 93.023 0.917647058823529 43 2 25 1 37 78 3781302 3781260 MAG: Pyrinomonadaceae bacterium isolate MFD09206.bin.c.1 genome assembly, chromosome: 1 blastn 156 62.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
26344910 26344910 PRJEB7799n_S_NODE_8239_length_175_cov_5.650000_g8202_i0 PRJEB7799 8239 175 5.65 9.8875 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 191 2.99e-44   NTclustered gi|112980863|gb|DQ829667.1| 171953 g8202 i0 87.209 180.417142857143 172 17 97 5 6 175 184 16 Uncultured Acidobacteria bacterium clone DON17 23S ribosomal RNA gene, partial sequence blastn 31573 191 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
26433236 26433236 PRJEB7799i_S_NODE_975_length_464_cov_10.561772_g946_i0 PRJEB7799 975 464 10.561772 49.00662208 root 1 Root_unresolved Root_unresolved 296 1.89e-75   NTclustered gi|2874253679|emb|OY969113.1| 171953 g946 i0 79.271 273.155172413793 439 80 94 11 29 464 3251996 3252426 MAG: uncultured Acidobacteriota bacterium isolate MFD03399.bin.1.55 genome assembly, chromosome: 1 blastn 126744 296 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
26433540 26433540 PRJEB7799o_S_NODE_327_length_314_cov_28.612903_g319_i0 PRJEB7799 327 314 28.612903 89.84451542 root 1 Root_unresolved Root_unresolved 279 1.24e-70   NTclustered gi|2874253709|emb|OY969474.1| 171953 g319 i0 85.294 430.993630573248 272 38 87 2 32 303 3917511 3917780 MAG: uncultured Acidobacteriota bacterium isolate MFD05747.bin.1.131 genome assembly, chromosome: 1 blastn 135332 281 0.99288256227758 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
26478356 26478356 PRJEB7799a_S_NODE_10376_length_182_cov_2.238095_g10341_i0 PRJEB7799 10376 182 2.238095 4.0733329 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 154 4.13e-33   NTclustered gi|2874253713|emb|OY969555.1| 171953 g10341 i0 82.759 57.1098901098901 174 28 95 2 10 182 3257070 3257242 MAG: uncultured Acidobacteriota bacterium isolate MFD02248.bin.1.120 genome assembly, chromosome: 1 blastn 10394 154 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
26478442 26478442 PRJEB7799a_S_NODE_12520_length_173_cov_1.623188_g12485_i0 PRJEB7799 12520 173 1.623188 2.80811524 Geothrix sp. PMB- 1962974 Bacteria Bacteria 80.5 6.67e-11   NTclustered gi|2563347696|gb|CP132333.1| 3068640 g12485 i0 97.826 3.49132947976879 46 1 27 0 61 106 103762 103807 Geothrix sp. PMB-07 chromosome, complete genome blastn 604 80.5 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix sp. PMB-07
26478485 26478485 PRJEB7799a_S_NODE_1376_length_342_cov_3.384365_g1341_i0 PRJEB7799 1376 342 3.384365 11.5745283 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 203 2.32e-63   NR HNY41858.1 2212468 g1341 i0 96.3 0.93859649122807 107 4 93.9 0 340 20 60 166 HNY41858.1 DNA-directed RNA polymerase subunit alpha [Bryobacteraceae bacterium] diamond 321 203 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
26481384 26481384 PRJEB7799p_S_NODE_11080_length_188_cov_6.163399_g11057_i0 PRJEB7799 11080 188 6.163399 11.58719012 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 54.7 0.004   NTclustered gi|2874253709|emb|OY969474.1| 171953 g11057 i0 100 1.22872340425532 29 0 15 0 106 134 4870901 4870873 MAG: uncultured Acidobacteriota bacterium isolate MFD05747.bin.1.131 genome assembly, chromosome: 1 blastn 231 54.7 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
26569764 26569764 PRJEB7799q_S_NODE_4952_length_163_cov_2.015625_g4942_i0 PRJEB7799 4952 163 2.015625 3.28546875 Granulicella 940557 Bacteria Bacteria 296 5.68e-76   NTclustered gi|470487846|ref|NR_076839.1| 940615 g4942 i0 99.387 163.01226993865 163 1 100 0 1 163 489 327 Granulicella tundricola strain MP5ACTX9 23S ribosomal RNA gene, complete sequence blastn 26571 296 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Granulicella Granulicella tundricola
32930045 32930045 PRJEB7799d_S_NODE_6873_length_165_cov_1.169231_g6863_i0 PRJEB7799 6873 165 1.169231 1.92923115 Terriglobia bacterium 2081523 Bacteria Bacteria 47.4 1.97e-4   NR HTG73845.1 2081523 g6863 i0 66.7 0.490909090909091 27 9 49.1 0 57 137 14 40 HTG73845.1 hypothetical protein [Terriglobia bacterium] diamond 81 47.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
32998533 32998533 PRJEB7799i_S_NODE_3483_length_244_cov_1.837321_g3453_i0 PRJEB7799 3483 244 1.837321 4.48306324 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 89.4 6.8e-21   NR HEY8560781.1 2283092 g3453 i0 84.2 2.75409836065574 76 12 93.4 0 3 230 33 108 HEY8560781.1 YMGG-like glycine zipper-containing protein [Pyrinomonadaceae bacterium] diamond 672 89.4 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32998625 32998625 PRJEB7799i_S_NODE_7795_length_176_cov_1.219858_g7765_i0 PRJEB7799 7795 176 1.219858 2.14695008 Acidobacteriota bacterium 1978231 Bacteria Bacteria 51.2 1.52e-5   NR MDQ2898304.1 1978231 g7765 i0 49.1 1.85795454545455 57 29 97.2 0 176 6 306 362 MDQ2898304.1 tetratricopeptide repeat protein [Acidobacteriota bacterium] diamond 327 51.2 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
33042739 33042739 PRJEB7799a_S_NODE_15132_length_164_cov_1.217054_g15097_i0 PRJEB7799 15132 164 1.217054 1.99596856 Pseudomonadati 3379134 Bacteria Bacteria 57.4 8.65e-8   NR MDP1832712.1 1962974 g15097 i0 53.8 4.73780487804878 52 23 93.3 1 162 10 456 507 MDP1832712.1 hypothetical protein [Geothrix sp.] diamond 777 57.8 0.993079584775087 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix sp.
33066931 33066931 PRJEB7799l_S_NODE_11253_length_164_cov_1.798450_g11224_i0 PRJEB7799 11253 164 1.79845 2.949458 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 59.3 1.72e-8   NR MDX1980168.1 2212468 g11224 i0 61.2 2.6890243902439 49 19 89.6 0 160 14 162 210 MDX1980168.1 hypothetical protein [Bryobacteraceae bacterium] diamond 441 59.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
33083939 33083939 PRJEB7799i_S_NODE_7422_length_180_cov_1.634483_g7392_i0 PRJEB7799 7422 180 1.634483 2.9420694 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 93.2 2.6499999999999996e-23   NR HEX8287547.1 2283092 g7392 i0 87.5 2.85 56 7 93.3 0 179 12 13 68 HEX8287547.1 DUF2945 domain-containing protein [Pyrinomonadaceae bacterium] diamond 513 93.2 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
33094040 33094040 PRJEB7799g_S_NODE_12046_length_162_cov_1.763780_g11830_i0 PRJEB7799 12046 162 1.76378 2.8573236 Bacteria 2 Bacteria Bacteria 52.4 7.5e-7   NR MCU1287814.1 1978231 g11830 i0 58 1.85185185185185 50 21 92.6 0 2 151 58 107 MCU1287814.1 hypothetical protein [Acidobacteriota bacterium] diamond 300 52.4 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
33101619 33101619 PRJEB7799p_S_NODE_3462_length_266_cov_4.714286_g3439_i0 PRJEB7799 3462 266 4.714286 12.54000076 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 44.7 0.0102   NR HEX4498831.1 2651171 g3439 i0 46.6 0.654135338345865 58 28 64.3 2 265 95 90 145 HEX4498831.1 IPTL-CTERM sorting domain-containing protein [Thermoanaerobaculia bacterium] diamond 174 44.7 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
33152237 33152237 PRJEB7799i_S_NODE_9864_length_160_cov_0.960000_g9834_i0 PRJEB7799 9864 160 0.96 1.536 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 55.8 2.88e-7   NR MEP6925264.1 2283092 g9834 i0 67.5 1.5375 40 13 75 0 157 38 474 513 MEP6925264.1 DegQ family serine endoprotease [Pyrinomonadaceae bacterium] diamond 246 55.8 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;