RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB7799", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJEB7799 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25526281 25526281 PRJEB7799a_S_NODE_521_length_456_cov_4.634204_g486_i0 PRJEB7799 521 456 4.634204 21.13197024 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 484 3.679999999999999e-132   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g486 i0 86.712 366.239035087719 444 50 96 8 11 449 5032724 5032285 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 167005 484 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
25798253 25798253 PRJEB7799a_S_NODE_3451_length_252_cov_6.907834_g3416_i0 PRJEB7799 3451 252 6.907834 17.40774168 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 287 5.75e-73   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g3416 i0 91.038 340.607142857143 212 19 84 0 34 245 5033539 5033750 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 85833 287 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
25799281 25799281 PRJEB7799g_S_NODE_12035_length_162_cov_2.748031_g11819_i0 PRJEB7799 12035 162 2.748031 4.45181022 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 233 4.49e-57   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g11819 i0 92.593 413.586419753086 162 12 100 0 1 162 5033536 5033697 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 67001 233 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;