RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB7799", tax_clade = "Luna-1 subcluster" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 4 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Luna-1 subcluster · 4 ✖

bioproject 1

  • PRJEB7799 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3547041 3547041 PRJEB7799_P_NODE_2143_length_199_cov_21.917647_g2136_i0 PRJEB7799 2143 199 21.917647 43.61611753 Rhodoluna 529883 Bacteria Bacteria 154 4.6e-33   NTclustered gi|1666461687|gb|CP040509.1| 232537 g2136 i0 94.059 65.2010050251256 101 6 51 0 88 188 476656 476756 Rhodoluna limnophila strain 27D-LEPI chromosome, complete genome blastn 12975 154 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna limnophila
9924508 9924508 PRJEB7799_P_NODE_2208_length_197_cov_19.404762_g2201_i0 PRJEB7799 2208 197 19.404762 38.22738114 Rhodoluna 529883 Bacteria Bacteria 154 4.55e-33   NTclustered gi|1666461687|gb|CP040509.1| 232537 g2201 i0 94.059 65.0812182741117 101 6 51 0 86 186 476656 476756 Rhodoluna limnophila strain 27D-LEPI chromosome, complete genome blastn 12821 154 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna limnophila
11199717 11199717 PRJEB7799_P_NODE_1049_length_252_cov_18.349776_g1042_i0 PRJEB7799 1049 252 18.349776 46.24143552 Rhodoluna 529883 Bacteria Bacteria 259 1.25e-64   NTclustered gi|1666461687|gb|CP040509.1| 232537 g1042 i0 89.1 227.873015873016 211 19 83 4 12 220 476756 476548 Rhodoluna limnophila strain 27D-LEPI chromosome, complete genome blastn 57424 259 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna limnophila
26024990 26024990 PRJEB7799c_S_NODE_9156_length_177_cov_14.056338_g9133_i0 PRJEB7799 9156 177 14.056338 24.87971826 Microbacteriaceae 85023 Bacteria Bacteria 228 2.3099999999999997e-55   NTclustered gi|1666461687|gb|CP040509.1| 232537 g9133 i0 92.025 94.5310734463277 163 12 92 1 12 174 476518 476679 Rhodoluna limnophila strain 27D-LEPI chromosome, complete genome blastn 16732 228 1 Bacteria Luna-1 subcluster Bacillati Actinomycetota Actinomycetes Micrococcales Microbacteriaceae Rhodoluna Rhodoluna limnophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;