RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB7799", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJEB7799 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33117630 33117630 PRJEB7799a_S_NODE_2135_length_297_cov_16.614504_g2100_i0 PRJEB7799 2135 297 16.614504 49.34507688 Longimonas sp. 2039626 Bacteria Bacteria 44.3 0.0171   NR WP_353564162.1 2039626 g2100 i0 52.5 0.404040404040404 40 19 40.4 0 114 233 69 108 WP_353564162.1 UDP-2,3-diacylglucosamine diphosphatase [Longimonas sp.] diamond 120 44.3 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salisaetaceae Longimonas Longimonas sp.
33118024 33118024 PRJEB7799i_S_NODE_6303_length_192_cov_1.573248_g6273_i0 PRJEB7799 6303 192 1.573248 3.02063616 Rhodothermales bacterium 2306054 Bacteria Bacteria 74.7 4.87e-14   NR MFB3132424.1 2306054 g6273 i0 55 1.875 60 27 93.8 0 189 10 225 284 MFB3132424.1 hypothetical protein [Rhodothermales bacterium] diamond 360 74.7 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;