RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

31 rows where bioproject = "PRJEB7799", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 31 ✖

tax_clade 1

  • Discoba · 31 ✖

bioproject 1

  • PRJEB7799 · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25529019 25529019 PRJEB7799p_S_NODE_24601_length_154_cov_1.840336_g24578_i0 PRJEB7799 24601 154 1.840336 2.83411744 Trypanosoma rangeli 5698 Euglenozoa other_Eukaryota 185 1.1899999999999997e-42   NTclustered gi|662247341|gb|KJ742907.1| 5698 g24578 i0 89.404 117.214285714286 151 10 96 5 3 150 9884 9737 Trypanosoma rangeli isolate SC58 intergenic spacer, 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S alpha ribosomal RNA gene, internal transcribed spacer 3, 28S gamma ribosomal RNA gene, internal transcribed spacer 4, 28S beta ribosomal RNA gene, internal transcribed spacer 5, 28S delta ribosomal RNA gene, internal transcribed spacer 6, and 28S zeta ribosomal RNA gene, complete sequence blastn 18051 185 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
25664421 25664421 PRJEB7799n_S_NODE_4114_length_225_cov_11.652632_g4077_i0 PRJEB7799 4114 225 11.652632 26.218422 Trypanosoma cruzi cruzi 85057 Euglenozoa other_Eukaryota 237 5.15e-58   NTclustered gi|1031970241|gb|CP015675.1| 85057 g4077 i0 90.556 89.8888888888889 180 16 83 1 38 217 342645 342467 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI25, partial sequence blastn 20225 237 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
25752927 25752927 PRJEB7799c_S_NODE_3002_length_226_cov_1.811518_g2979_i0 PRJEB7799 3002 226 1.811518 4.09403068 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 204 5.25e-48   NTclustered gi|339896985|ref|XM_001463515.2| 435258 g2979 i0 84.211 54.3141592920354 209 33 92 0 2 210 2386 2594 Leishmania infantum JPCM5 polyubiquitin partial mRNA blastn 12275 204 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania infantum
25798648 25798648 PRJEB7799c_S_NODE_1571_length_282_cov_3.056680_g1548_i0 PRJEB7799 1571 282 3.05668 8.6198376 Trypanoplasma borreli 5710 Euglenozoa other_Eukaryota 100 9.16e-17   NTclustered gi|7417235|gb|AF225211.1|AF225211 5710 g1548 i0 80.62 0.457446808510638 129 25 46 0 127 255 1350 1222 Trypanoplasma borreli ribosomal protein L3, genomic sequence blastn 129 100 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Trypanoplasma Trypanoplasma borreli
25798842 25798842 PRJEB7799c_S_NODE_8219_length_180_cov_1.103448_g8196_i0 PRJEB7799 8219 180 1.103448 1.9862064 Neobodo sp. HFCC817 2728143 Euglenozoa other_Eukaryota 174 3.12e-39   NTclustered gi|1832418750|gb|MT355125.1| 2728143 g8196 i0 93.966 57.1222222222222 116 5 64 2 1 116 1986 2099 Neobodo sp. HFCC817 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 10282 174 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo sp. HFCC817
25800574 25800574 PRJEB7799n_S_NODE_4459_length_218_cov_2.759563_g4422_i0 PRJEB7799 4459 218 2.759563 6.01584734 uncultured Bodonidae 547485 Euglenozoa other_Eukaryota 375 1.0099999999999998e-99   NTclustered gi|406609826|dbj|AB749101.1| 547485 g4422 i0 97.706 94.4174311926605 218 5 100 0 1 218 786 569 Uncultured Bodonidae gene for 18S ribosomal RNA, partial sequence, clone: Cn-St.1-52 blastn 20583 375 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae   uncultured Bodonidae
25800663 25800663 PRJEB7799n_S_NODE_739_length_458_cov_20.111111_g703_i0 PRJEB7799 739 458 20.111111 92.10888838 Peranema trichophorum 56466 Euglenozoa other_Eukaryota 627 5.799999999999999e-175   NTclustered gi|27461806|gb|AY130826.1| 56466 g703 i0 98.056 1.50436681222707 360 7 79 0 26 385 360 1 Peranema trichophorum voucher Carolina Biol. Supp. Co. (CBS) CE 13-1838 large subunit ribosomal RNA gene, partial sequence blastn 689 627 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemidae Peranema Peranema trichophorum
25889124 25889124 PRJEB7799m_S_NODE_787_length_213_cov_3.741573_g782_i0 PRJEB7799 787 213 3.741573 7.96955049 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 239 1.34e-58   NTclustered gi|1002342157|gb|KT944307.1| 5684 g782 i0 86.878 109.032863849765 221 19 100 7 1 213 1770 1552 Leptomonas seymouri strain ATCC 30220 28S ribosomal RNA gene, partial sequence blastn 23224 239 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas seymouri
25934927 25934927 PRJEB7799c_S_NODE_31540_length_154_cov_1.512605_g31517_i0 PRJEB7799 31540 154 1.512605 2.3294117 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 202 1.19e-47   NTclustered gi|1624756043|ref|XM_029028950.1| 67003 g31517 i0 90.323 1.00649350649351 155 13 100 2 1 154 1529 1376 Trypanosoma theileri putative ATPase beta subunit (TM35_000331940), partial mRNA blastn 155 202 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
25935022 25935022 PRJEB7799c_S_NODE_7388_length_183_cov_5.770270_g7365_i0 PRJEB7799 7388 183 5.77027 10.5595941 uncultured Bodonidae 547485 Euglenozoa other_Eukaryota 329 6.43e-86   NTclustered gi|674656897|gb|KJ907783.1| 547485 g7365 i0 99.448 137.234972677596 181 1 99 0 2 182 1 181 Uncultured Bodonidae clone METASED30 16S ribosomal RNA gene, partial sequence blastn 25114 329 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae   uncultured Bodonidae
25937217 25937217 PRJEB7799p_S_NODE_17884_length_170_cov_1.548148_g17861_i0 PRJEB7799 17884 170 1.548148 2.6318516 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 80.5 6.52e-11   NTclustered gi|1002453653|ref|XM_015799444.1| 157538 g17861 i0 92.727 0.647058823529412 55 4 32 0 1 55 697 751 Leptomonas pyrrhocoris 40S ribosomal protein S2 mRNA blastn 110 80.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
26025510 26025510 PRJEB7799n_S_NODE_9124_length_169_cov_3.208955_g9087_i0 PRJEB7799 9124 169 3.208955 5.42313395 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 263 5.989999999999999e-66   NTclustered gi|11037201|gb|AF208879.1|AF208879 140242 g9087 i0 94.675 158.952662721893 169 9 100 0 1 169 777 945 Cruzella marina large subunit ribosomal RNA gene, partial sequence blastn 26863 263 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Cruzella Cruzella marina
26070946 26070946 PRJEB7799c_S_NODE_517_length_404_cov_11.970190_g494_i0 PRJEB7799 517 404 11.97019 48.3595676 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 520 8.84e-143   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g494 i0 91.049 134.037128712871 391 26 95 7 22 404 4413 4802 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 54151 520 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
26070958 26070958 PRJEB7799c_S_NODE_5621_length_193_cov_2.031646_g5598_i0 PRJEB7799 5621 193 2.031646 3.92107678 Leishmania major strain Friedlin 347515 Euglenozoa other_Eukaryota 189 1.22e-43   NTclustered gi|157867286|ref|XM_001682146.1| 347515 g5598 i0 88.535 22.9378238341969 157 16 81 2 30 185 1 156 Leishmania major strain Friedlin putative 60S ribosomal protein L39 partial mRNA blastn 4427 189 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania major
26072896 26072896 PRJEB7799o_S_NODE_2933_length_173_cov_2.028986_g2925_i0 PRJEB7799 2933 173 2.028986 3.51014578 Trypanosoma cruzi cruzi 85057 Euglenozoa other_Eukaryota 209 8.15e-50   NTclustered gi|1031970241|gb|CP015675.1| 85057 g2925 i0 92 97.7167630057804 150 11 87 1 3 152 342497 342645 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI25, partial sequence blastn 16905 209 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
26161302 26161302 PRJEB7799h_S_NODE_925_length_204_cov_6.976331_g922_i0 PRJEB7799 925 204 6.976331 14.23171524 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 209 9.98e-50   NTclustered gi|440222375|gb|JX030043.1| 5659 g922 i0 86.735 105.779411764706 196 16 92 7 17 204 1781 1588 Leishmania amazonensis isolate LaPH8.rRNA.13 28S ribosomal RNA (LSU-alpha), partial sequence blastn 21579 211 0.990521327014218 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
26209078 26209078 PRJEB7799n_S_NODE_5934_length_195_cov_6.475000_g5897_i0 PRJEB7799 5934 195 6.475 12.62625 Trypanosoma conorhini 83891 Euglenozoa other_Eukaryota 309 9.06e-80   NTclustered gi|1673141461|ref|XR_003828664.1| 83891 g5897 i0 96.277 135.625641025641 188 7 96 0 8 195 5205 5018 Trypanosoma conorhini 28S ribosomal RNA (Tco025E_06705), rRNA blastn 26447 309 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
26209715 26209715 PRJEB7799p_S_NODE_3206_length_273_cov_3.852941_g3183_i0 PRJEB7799 3206 273 3.852941 10.51852893 Trypanosoma grayi 71804 Euglenozoa other_Eukaryota 152 2.3999999999999999e-32   NTclustered gi|686640876|ref|XM_009314609.1| 71804 g3183 i0 86.331 2.54578754578755 139 19 51 0 135 273 638 500 Trypanosoma grayi 40S ribosomal protein SA partial mRNA blastn 695 152 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grayi
26296853 26296853 PRJEB7799c_S_NODE_20494_length_161_cov_1.952381_g20471_i0 PRJEB7799 20494 161 1.952381 3.14333341 Leishmania 5658 Euglenozoa other_Eukaryota 193 7.55e-45   NTclustered gi|2593259423|emb|OY748514.1| 5660 g20471 i0 90.411 87.6832298136646 146 14 91 0 1 146 357550 357405 Leishmania braziliensis isolate MHOM/BR/75/M2903 genome assembly, chromosome: 28 blastn 14117 193 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
26297667 26297667 PRJEB7799p_S_NODE_3734_length_259_cov_8.401786_g3711_i0 PRJEB7799 3734 259 8.401786 21.76062574 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 78.7 3.89e-10   NTclustered gi|148533849|gb|EF405636.1| 127150 g3711 i0 100 0.803088803088803 42 0 16 0 90 131 202 243 Rhynchomonas nasuta strain HFCC359 internal transcribed spacer 1, partial sequence blastn 208 78.7 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
26345575 26345575 PRJEB7799p_S_NODE_3687_length_260_cov_17.426667_g3664_i0 PRJEB7799 3687 260 17.426667 45.3093342 Trypanosoma cruzi cruzi 85057 Euglenozoa other_Eukaryota 231 2.84e-56   NTclustered gi|1031970241|gb|CP015675.1| 85057 g3664 i0 88.601 82.3230769230769 193 19 74 3 45 236 342645 342455 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI25, partial sequence blastn 21404 231 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
26478859 26478859 PRJEB7799a_S_NODE_4248_length_236_cov_3.606965_g4213_i0 PRJEB7799 4248 236 3.606965 8.5124374 Zelonia costaricensis 372075 Euglenozoa other_Eukaryota 291 4.119999999999999e-74   NTclustered gi|1002342154|gb|KT944304.1| 372075 g4213 i0 88.889 128.5 243 18 100 7 1 236 1505 1745 Zelonia costaricensis strain 15EC 28S ribosomal RNA gene, partial sequence blastn 30326 291 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Zelonia Zelonia costaricensis
26479162 26479162 PRJEB7799c_S_NODE_14136_length_168_cov_1.428571_g14113_i0 PRJEB7799 14136 168 1.428571 2.39999928 Bodo saltans 75058 Euglenozoa other_Eukaryota 114 1.71e-31   NR CUG80347.1 75058 g14113 i0 92.9 1 56 4 100 0 1 168 40 95 CUG80347.1 60S ribosomal protein L30, putative [Bodo saltans] diamond 168 114 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32912775 32912775 PRJEB7799c_S_NODE_14097_length_168_cov_2.729323_g14074_i0 PRJEB7799 14097 168 2.729323 4.58526264 Trypanosoma congolense IL3 5692 Euglenozoa other_Eukaryota 55.5 4.11e-7   NR CCD14963.1 1068625 g14074 i0 59.2 2.625 49 20 87.5 0 168 22 256 304 CCD14963.1 unnamed protein product [Trypanosoma congolense IL3000] diamond 441 55.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma congolense
32912799 32912799 PRJEB7799c_S_NODE_6041_length_190_cov_1.174194_g6018_i0 PRJEB7799 6041 190 1.174194 2.2309686 Bodo saltans 75058 Euglenozoa other_Eukaryota 70.1 1.06e-12   NR CUG90360.1 75058 g6018 i0 63 0.852631578947368 54 20 85.3 0 188 27 167 220 CUG90360.1 60S ribosomal protein L13a, putative [Bodo saltans] diamond 162 70.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32964355 32964355 PRJEB7799c_S_NODE_4122_length_207_cov_1.162791_g4099_i0 PRJEB7799 4122 207 1.162791 2.40697737 Bodo saltans 75058 Euglenozoa other_Eukaryota 82 1.52e-17   NR CUG02261.1 75058 g4099 i0 75 1.50724637681159 52 12 73.9 1 207 55 126 177 CUG02261.1 40S ribosomal protein S2, putative [Bodo saltans] diamond 312 82 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32974661 32974661 PRJEB7799c_S_NODE_13450_length_169_cov_1.194030_g13427_i0 PRJEB7799 13450 169 1.19403 2.0179107 Trypanosoma 5690 Euglenozoa other_Eukaryota 63.2 4.35e-10   NR KAG8347531.1 5699 g13427 i0 71.8 3.46153846153846 39 11 69.2 0 4 120 204 242 KAG8347531.1 putative 60S ribosomal protein L6 [Trypanosoma vivax] diamond 585 63.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma vivax
33008650 33008650 PRJEB7799h_S_NODE_1515_length_188_cov_1.450980_g1512_i0 PRJEB7799 1515 188 1.45098 2.7278424 Kinetoplastea 5653 Euglenozoa other_Eukaryota 95.9 6.62e-24   NR CUG81215.1 75058 g1512 i0 71.2 1.88297872340426 59 17 94.1 0 2 178 48 106 CUG81215.1 60S ribosomal protein L44, putative [Bodo saltans] diamond 354 96.3 0.995846313603323 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
33015412 33015412 PRJEB7799c_S_NODE_29604_length_155_cov_1.958333_g29581_i0 PRJEB7799 29604 155 1.958333 3.03541615 Bodo saltans 75058 Euglenozoa other_Eukaryota 87.4 3.18e-20   NR CUE63139.1 75058 g29581 i0 91.5 0.909677419354839 47 4 91 0 155 15 107 153 CUE63139.1 40S ribosomal protein S18, putative [Bodo saltans] diamond 141 87.4 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
33016210 33016210 PRJEB7799n_S_NODE_9532_length_166_cov_1.458015_g9495_i0 PRJEB7799 9532 166 1.458015 2.4203049 Strigomonas culicis 28005 Euglenozoa other_Eukaryota 55.5 2.31e-8   NR EPY33267.1 28005 g9495 i0 51.1 1.62650602409639 45 22 81.3 0 3 137 37 81 EPY33267.1 large subunit ribosomal protein L23e [Strigomonas culicis] diamond 270 55.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
33094125 33094125 PRJEB7799p_S_NODE_20518_length_163_cov_3.500000_g20495_i0 PRJEB7799 20518 163 3.5 5.705 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 47 1.02e-4   NR KAJ9469984.1 91374 g20495 i0 62.2 1.38036809815951 37 10 60.7 1 135 37 78 114 KAJ9469984.1 hypothetical protein DIPPA_35953 [Diplonema papillatum] diamond 225 47 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;