RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB7799", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJEB7799 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25936901 25936901 PRJEB7799o_S_NODE_1492_length_203_cov_5.113095_g1484_i0 PRJEB7799 1492 203 5.113095 10.37958285 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 71.3 4.88e-8   NTclustered gi|923123658|ref|XM_013899844.1| 461836 g1484 i0 97.561 7.42857142857143 41 1 20 0 1 41 381 421 Thecamonas trahens ATCC 50062 ubiquitin/ribosomal protein S27 fusion protein (AMSG_08067), partial mRNA blastn 1508 71.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26481238 26481238 PRJEB7799o_S_NODE_1592_length_200_cov_3.309091_g1584_i0 PRJEB7799 1592 200 3.309091 6.618182 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 69.4 1.73e-7   NTclustered gi|923124497|ref|XM_013900263.1| 461836 g1584 i0 97.5 2.545 40 1 20 0 1 40 420 459 Thecamonas trahens ATCC 50062 30S ribosomal protein S10p/S20e (AMSG_07948), mRNA blastn 509 69.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;