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contig_metadata

18 rows where bioproject = "PRJEB7799", tax_clade = "Amoebozoa" and tax_phylum = "Tubulinea"

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tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 18 ✖

tax_clade 1

  • Amoebozoa · 18 ✖

bioproject 1

  • PRJEB7799 · 18 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25664406 25664406 PRJEB7799n_S_NODE_3602_length_238_cov_3.719212_g3565_i0 PRJEB7799 3602 238 3.719212 8.85172456 Cryptodifflugia oviformis 1165352 Tubulinea other_Eukaryota 416 6.579999999999998e-112   NTclustered gi|2517949720|gb|OR125025.1| 1165352 g3565 i0 98.319 95.1848739495798 238 3 100 1 1 238 797 1033 Cryptodifflugia oviformis isolate strain_9 small subunit ribosomal RNA gene, partial sequence blastn 22654 416 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia oviformis
25753248 25753248 PRJEB7799j_S_NODE_194_length_279_cov_11.897541_g189_i0 PRJEB7799 194 279 11.897541 33.19413939 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 490 4.59e-134   NTclustered gi|300078496|gb|GU001158.1| 5778 g189 i0 98.556 37.4802867383513 277 4 99 0 3 279 946 1222 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10457 490 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
25753503 25753503 PRJEB7799n_S_NODE_6818_length_186_cov_3.894040_g6781_i0 PRJEB7799 6818 186 3.89404 7.2429144 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 344 2.34e-90   NTclustered gi|2675812010|gb|PP339676.1| 5778 g6781 i0 100 100 186 0 100 0 1 186 107 292 Vermamoeba vermiformis isolate TFEW12 small subunit ribosomal RNA gene, partial sequence blastn 18600 344 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
25797945 25797945 PRJEB7799a_S_NODE_1411_length_339_cov_8.101974_g1376_i0 PRJEB7799 1411 339 8.101974 27.46569186 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 431 3.519999999999999e-116   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g1376 i0 90.12 84.976401179941 334 30 98 3 8 339 3904 3572 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 28807 431 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
25798357 25798357 PRJEB7799a_S_NODE_5163_length_222_cov_7.780749_g5128_i0 PRJEB7799 5163 222 7.780749 17.27326278 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 372 1.33e-98   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g5128 i0 96.847 37.1396396396396 222 7 100 0 1 222 4399 4178 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8245 372 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
25799709 25799709 PRJEB7799k_S_NODE_1963_length_201_cov_3.692771_g1957_i0 PRJEB7799 1963 201 3.692771 7.42246971 Rhizamoeba saxonica 200886 Tubulinea other_Eukaryota 76.8 1.04e-9   NTclustered gi|300078497|gb|GU001159.1| 200886 g1957 i0 77.863 0.651741293532338 131 23 64 5 73 201 4312 4186 Rhizamoeba saxonica 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 131 76.8 1 Eukaryota Amoebozoa   Tubulinea Elardia Leptomyxida Flabellulidae Rhizamoeba Rhizamoeba saxonica
25800662 25800662 PRJEB7799n_S_NODE_7395_length_181_cov_1.869863_g7358_i0 PRJEB7799 7395 181 1.869863 3.38445203 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 329 6.340000000000001e-86   NTclustered gi|300078496|gb|GU001158.1| 5778 g7358 i0 100 3.38121546961326 178 0 98 0 1 178 3493 3670 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 612 329 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
25800820 25800820 PRJEB7799o_S_NODE_4835_length_152_cov_5.974359_g4827_i0 PRJEB7799 4835 152 5.974359 9.08102568 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 86.1 1.23e-12   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g4827 i0 93.22 57.6842105263158 59 3 39 1 92 150 4366 4423 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8768 86.1 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
25934375 25934375 PRJEB7799a_S_NODE_2044_length_301_cov_15.266917_g2009_i0 PRJEB7799 2044 301 15.266917 45.95342017 Cryptodifflugia oviformis 1165352 Tubulinea other_Eukaryota 523 4.939999999999998e-144   NTclustered gi|2517949732|gb|OR125031.1| 1165352 g2009 i0 98.007 78.0033222591362 301 6 100 0 1 301 735 1035 Cryptodifflugia oviformis isolate strain_6 small subunit ribosomal RNA gene, partial sequence blastn 23479 523 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia oviformis
25934695 25934695 PRJEB7799a_S_NODE_788_length_402_cov_16.711172_g753_i0 PRJEB7799 788 402 16.711172 67.17891144 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 632 1.0799999999999996e-176   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g753 i0 96.825 63.5024875621891 378 12 94 0 25 402 2659 2282 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 25528 632 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
25935070 25935070 PRJEB7799d_S_NODE_1228_length_255_cov_5.668182_g1218_i0 PRJEB7799 1228 255 5.668182 14.4538641 Cryptodifflugia oviformis 1165352 Tubulinea other_Eukaryota 444 3.27e-120   NTclustered gi|2517949720|gb|OR125025.1| 1165352 g1218 i0 98.419 60.956862745098 253 3 99 1 3 255 720 971 Cryptodifflugia oviformis isolate strain_9 small subunit ribosomal RNA gene, partial sequence blastn 15544 444 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia oviformis
26025134 26025134 PRJEB7799h_S_NODE_4284_length_165_cov_5.869231_g4281_i0 PRJEB7799 4284 165 5.869231 9.68423115 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 300 4.46e-77   NTclustered gi|300078496|gb|GU001158.1| 5778 g4281 i0 99.394 57.6242424242424 165 1 100 0 1 165 1221 1057 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 9508 300 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
26070431 26070431 PRJEB7799a_S_NODE_3229_length_258_cov_3.049327_g3194_i0 PRJEB7799 3229 258 3.049327 7.86726366 Cryptodifflugia operculata 1078836 Tubulinea other_Eukaryota 318 2.1e-82   NTclustered gi|2651357777|gb|PP174294.1| 1078836 g3194 i0 89.189 4.12403100775194 259 22 100 5 1 258 3925 4178 Cryptodifflugia operculata isolate 75 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1064 318 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Cryptodifflugiidae Cryptodifflugia Cryptodifflugia operculata
26072524 26072524 PRJEB7799n_S_NODE_10013_length_163_cov_1.781250_g9976_i0 PRJEB7799 10013 163 1.78125 2.9034375 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 268 1.24e-67   NTclustered gi|909719645|gb|KT185625.1| 5778 g9976 i0 96.319 2 163 6 100 0 1 163 6862 7024 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 326 268 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
26209912 26209912 PRJEB7799p_S_NODE_7566_length_206_cov_4.134503_g7543_i0 PRJEB7799 7566 206 4.134503 8.51707618 Saccamoeba sp. W187G 1215626 Tubulinea other_Eukaryota 381 2.0199999999999994e-101   NTclustered gi|399764209|gb|JQ271720.1| 1215626 g7543 i0 100 87.8300970873786 206 0 100 0 1 206 345 140 Saccamoeba sp. W187G 18S ribosomal RNA gene, partial sequence blastn 18093 381 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Saccamoeba Saccamoeba sp. W187G
26297401 26297401 PRJEB7799n_S_NODE_1822_length_314_cov_18.311828_g1785_i0 PRJEB7799 1822 314 18.311828 57.49913992 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 501 2.43e-137   NTclustered gi|300078496|gb|GU001158.1| 5778 g1785 i0 100 32.1305732484076 271 0 86 0 24 294 950 1220 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10089 501 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
26432825 26432825 PRJEB7799a_S_NODE_4983_length_225_cov_2.942105_g4948_i0 PRJEB7799 4983 225 2.942105 6.61973625 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 342 1.0599999999999999e-89   NTclustered gi|300078496|gb|GU001158.1| 5778 g4948 i0 100 5.29333333333333 185 0 82 0 24 208 1190 1006 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1191 342 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
26568877 26568877 PRJEB7799c_S_NODE_11576_length_172_cov_6.306569_g11553_i0 PRJEB7799 11576 172 6.306569 10.84729868 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 307 2.79e-79   NTclustered gi|300078496|gb|GU001158.1| 5778 g11553 i0 98.837 9.74418604651163 172 2 100 0 1 172 1043 1214 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1676 307 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;