RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJEB76780" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB76780 · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
138692 138692 PRJEB76780_P_NODE_12921_length_243_cov_1.829412_g12821_i0 PRJEB76780 12921 243 1.829412 4.44547116 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 193 1.24e-44   NTclustered gi|2318758437|ref|XM_051209067.1| 6185 g12821 i0 82.301 2.26748971193416 226 36 92 3 2 225 4323 4100 Schistosoma haematobium uncharacterized protein (MS3_00001600), mRNA blastn 551 193 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
2688811 2688811 PRJEB76780_P_NODE_12123_length_246_cov_1.364162_g12023_i0 PRJEB76780 12123 246 1.364162 3.35583852 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.022   NTclustered gi|690534546|emb|LN085744.1| 99802 g12023 i0 100 0.113821138211382 28 0 11 0 4 31 2453 2426 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0003758 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
3964946 3964946 PRJEB76780_P_NODE_6944_length_306_cov_2.008584_g6844_i0 PRJEB76780 6944 306 2.008584 6.14626704 Platyhelminthes 6157 Platyhelminthes Platyhelminthes 163 4.26e-48   NR XP_018650840.1 6183 g6844 i0 69.3 13.8627450980392 101 30 99 1 305 3 7 106 XP_018650840.1 putative protein arginine N-methyltransferase 1 [Schistosoma mansoni] diamond 4242 164 0.99390243902439 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
5241391 5241391 PRJEB76780_P_NODE_7665_length_292_cov_0.958904_g7565_i0 PRJEB76780 7665 292 0.958904 2.79999968 Metazoa 33208 Platyhelminthes Platyhelminthes 93.6 9.42e-20   NR TPP59494.1 46835 g7565 i0 50 16.2534246575342 84 42 86.3 0 291 40 658 741 TPP59494.1 ELAV like protein 2/3/4 [Fasciola gigantica] diamond 4746 93.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Fasciolidae Fasciola Fasciola gigantica
19264292 19264292 PRJEB76780_P_NODE_2796_length_492_cov_5.350835_g2696_i0 PRJEB76780 2796 492 5.350835 26.3261082 Opisthokonta 33154 Platyhelminthes Platyhelminthes 206 4.27e-58   NR KAH9283812.1 6210 g2696 i0 64.5 32.8536585365854 155 54 94.5 1 7 471 881 1034 KAH9283812.1 40S ribosomal protein S18 [Echinococcus granulosus] diamond 16164 207 0.995169082125604 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus
23090723 23090723 PRJEB76780_P_NODE_499_length_1118_cov_3.390431_g443_i0 PRJEB76780 499 1118 3.390431 37.90501858 Schistosoma mansoni 6183 Platyhelminthes Platyhelminthes 614 1.16e-170   NTclustered gi|1369885|gb|L78441.1|SCM14332R 6183 g443 i0 84.959 9.07692307692308 605 91 80 0 361 965 605 1 Schistosoma mansoni 14-3-3-2 mRNA, 3' end of cds blastn 10148 614 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
27855478 27855478 PRJEB76780_P_NODE_1405_length_699_cov_2.634185_g1311_i0 PRJEB76780 1405 699 2.634185 18.41295315 Paragonimus skrjabini miyazakii 59628 Platyhelminthes Platyhelminthes 56.6 3.52e-5   NR KAF7261212.1 59628 g1311 i0 31.1 0.510729613733906 119 74 50.2 5 125 475 17 129 KAF7261212.1 hypothetical protein EG68_01484 [Paragonimus skrjabini miyazakii] diamond 357 56.6 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Troglotrematidae Paragonimus Paragonimus skrjabini miyazakii
27879830 27879830 PRJEB76780_P_NODE_12885_length_244_cov_0.912281_g12785_i0 PRJEB76780 12885 244 0.912281 2.22596564 Trichobilharzia 100601 Platyhelminthes Platyhelminthes 43.1 0.0272   NR CAH8864886.1 157069 g12785 i0 40.8 2.80327868852459 76 42 89.8 2 244 26 141 216 CAH8864886.1 unnamed protein product [Trichobilharzia regenti] diamond 684 43.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Trichobilharzia Trichobilharzia regenti
28195396 28195396 PRJEB76780_P_NODE_12326_length_246_cov_0.901734_g12226_i0 PRJEB76780 12326 246 0.901734 2.21826564 Metazoa 33208 Platyhelminthes Platyhelminthes 105 2.36e-24   NR OON13331.1 6198 g12226 i0 69.1 2.80487804878049 81 25 98.8 0 2 244 1162 1242 OON13331.1 RNA binding repeat protein, Pumilio-family [Opisthorchis viverrini] diamond 690 105 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
30563772 30563772 PRJEB76780_P_NODE_11153_length_250_cov_0.881356_g11053_i0 PRJEB76780 11153 250 0.881356 2.20339 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 57.4 2.69e-7   NR VDL60192.1 6216 g11053 i0 42.6 5.88 68 38 80.4 1 218 18 21 88 VDL60192.1 unnamed protein product [Hymenolepis diminuta] diamond 1470 57.8 0.993079584775087 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Hymenolepididae Hymenolepis Hymenolepis diminuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;