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contig_metadata

17 rows where bioproject = "PRJEB76780", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 17 ✖

tax_phylum 1

  • Acidobacteriota · 17 ✖

tax_kingdom 1

bioproject 1

  • PRJEB76780 · 17 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16715391 16715391 PRJEB76780_P_NODE_10094_length_255_cov_1.285714_g9994_i0 PRJEB76780 10094 255 1.285714 3.2785707 Terriglobia bacterium 2081523 Bacteria Bacteria 118 1.31e-30   NR HET9942311.1 2081523 g9994 i0 68.2 1 85 27 100 0 1 255 101 185 HET9942311.1 enoyl-CoA hydratase-related protein [Terriglobia bacterium] diamond 255 118 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
16715397 16715397 PRJEB76780_P_NODE_10774_length_251_cov_1.601124_g10674_i0 PRJEB76780 10774 251 1.601124 4.01882124 Acidobacteriota bacterium 1978231 Bacteria Bacteria 154 2.1199999999999998e-42   NR MBS1786194.1 1978231 g10674 i0 90.4 3.9681274900398402 83 8 99.2 0 251 3 389 471 MBS1786194.1 amidohydrolase [Acidobacteriota bacterium] diamond 996 154 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
19264247 19264247 PRJEB76780_P_NODE_10976_length_251_cov_0.876404_g10876_i0 PRJEB76780 10976 251 0.876404 2.19977404 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 228 3.5199999999999986e-55   NTclustered gi|2874254091|emb|OY970174.1| 171953 g10876 i0 85.202 10.4501992031873 223 31 88 2 6 227 1102071 1101850 MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 blastn 2623 228 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
26590758 26590758 PRJEB76780_P_NODE_2861_length_487_cov_1.432367_g2761_i0 PRJEB76780 2861 487 1.432367 6.97562729 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 184 3.5e-53   NR HEX8197009.1 2283092 g2761 i0 56.3 1.90349075975359 160 70 98.6 0 8 487 14 173 HEX8197009.1 acetyl-CoA hydrolase/transferase C-terminal domain-containing protein [Pyrinomonadaceae bacterium] diamond 927 184 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
27223690 27223690 PRJEB76780_P_NODE_8323_length_281_cov_1.125000_g8223_i0 PRJEB76780 8323 281 1.125 3.16125 Acidobacteriota bacterium 1978231 Bacteria Bacteria 69.7 1.38e-11   NR MBM3735564.1 1978231 g8223 i0 43.5 0.907473309608541 85 43 85.4 2 42 281 83 167 MBM3735564.1 DUF2278 family protein [Acidobacteriota bacterium] diamond 255 69.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27879828 27879828 PRJEB76780_P_NODE_11725_length_248_cov_0.891429_g11625_i0 PRJEB76780 11725 248 0.891429 2.21074392 Bacteria 2 Bacteria Bacteria 55.1 1.63e-6   NR MBM3735564.1 1978231 g11625 i0 47.1 1.93548387096774 51 26 61.7 1 166 14 4 53 MBM3735564.1 DUF2278 family protein [Acidobacteriota bacterium] diamond 480 55.5 0.992792792792793 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28360589 28360589 PRJEB76780_P_NODE_886_length_882_cov_1.458591_g803_i0 PRJEB76780 886 882 1.458591 12.86477262 Acidobacteriaceae bacterium 2052142 Bacteria Bacteria 82.4 2.32e-13   NR HXS11305.1 2052142 g803 i0 33 0.731292517006803 215 134 71.8 8 861 229 219 427 HXS11305.1 Ig-like domain repeat protein [Acidobacteriaceae bacterium] diamond 645 82.4 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   Acidobacteriaceae bacterium
28606032 28606032 PRJEB76780_P_NODE_6227_length_324_cov_0.932271_g6127_i0 PRJEB76780 6227 324 0.932271 3.02055804 Pseudomonadati 3379134 Bacteria Bacteria 102 1.37e-22   NR MDA0205526.1 1978231 g6127 i0 51.9 6.89814814814815 106 50 98.1 1 6 323 270 374 MDA0205526.1 SLC13 family permease [Acidobacteriota bacterium] diamond 2235 103 0.990291262135922 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28676592 28676592 PRJEB76780_P_NODE_9807_length_259_cov_1.672043_g9707_i0 PRJEB76780 9807 259 1.672043 4.33059137 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 55.1 1.98e-6   NR HVS13692.1 2651171 g9707 i0 36.3 3.44015444015444 80 49 90.3 1 17 250 77 156 HVS13692.1 CHRD domain-containing protein [Thermoanaerobaculia bacterium] diamond 891 55.1 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
28732389 28732389 PRJEB76780_P_NODE_6067_length_328_cov_0.894118_g5967_i0 PRJEB76780 6067 328 0.894118 2.93270704 Pseudomonadati 3379134 Bacteria Bacteria 117 4.37e-28   NR MEM1247880.1 1978231 g5967 i0 58.9 8.12195121951219 90 37 82.3 0 278 9 6 95 MEM1247880.1 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase [Acidobacteriota bacterium] diamond 2664 118 0.991525423728814 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28897362 28897362 PRJEB76780_P_NODE_12208_length_246_cov_0.901734_g12108_i0 PRJEB76780 12208 246 0.901734 2.21826564 Bryobacterales bacterium 2026791 Bacteria Bacteria 54.3 3.32e-6   NR MBL8216997.1 2026791 g12108 i0 41 0.74390243902439 61 36 74.4 0 183 1 30 90 MBL8216997.1 ankyrin repeat domain-containing protein [Bryobacterales bacterium] diamond 183 54.3 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
29995524 29995524 PRJEB76780_P_NODE_6211_length_324_cov_1.243028_g6111_i0 PRJEB76780 6211 324 1.243028 4.02741072 root 1 Root_unresolved Root_unresolved 99 4.449999999999999e-24   NR HEY4492495.1 1978231 g6111 i0 59.7 6.98148148148148 77 30 70.4 1 229 2 8 84 HEY4492495.1 glycine cleavage system protein GcvH [Acidobacteriota bacterium] diamond 2262 100 0.99 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31108334 31108334 PRJEB76780_P_NODE_9955_length_257_cov_1.271739_g9855_i0 PRJEB76780 9955 257 1.271739 3.26836923 Acidobacteriota bacterium 1978231 Bacteria Bacteria 43.5 0.0222   NR TDI23913.1 1978231 g9855 i0 32.8 0.747081712062257 64 43 74.7 0 59 250 14 77 TDI23913.1 MAG: cyclase family protein [Acidobacteriota bacterium] diamond 192 43.5 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31740826 31740826 PRJEB76780_P_NODE_1317_length_720_cov_3.041731_g1224_i0 PRJEB76780 1317 720 3.041731 21.9004632 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 114 1.21e-25   NR HUO59097.1 2952895 g1224 i0 33.9 1.03333333333333 248 151 99.2 7 715 2 127 371 HUO59097.1 hypothetical protein [Candidatus Acidiferrales bacterium] diamond 744 114 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
31772534 31772534 PRJEB76780_P_NODE_11057_length_250_cov_1.457627_g10957_i0 PRJEB76780 11057 250 1.457627 3.6440675 Acidobacteriota bacterium 1978231 Bacteria Bacteria 138 1.26e-36   NR MDQ3634614.1 1978231 g10957 i0 77.1 10.032 83 18 98.4 1 4 249 30 112 MDQ3634614.1 NADP-dependent isocitrate dehydrogenase [Acidobacteriota bacterium] diamond 2508 138 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32081626 32081626 PRJEB76780_P_NODE_11778_length_248_cov_0.891429_g11678_i0 PRJEB76780 11778 248 0.891429 2.21074392 Pseudomonadati 3379134 Bacteria Bacteria 84.3 5.19e-17   NR MBP8274522.1 1978231 g11678 i0 51.4 5.29838709677419 72 35 87.1 0 33 248 188 259 MBP8274522.1 PAS domain S-box protein [Acidobacteriota bacterium] diamond 1314 85.1 0.990599294947121 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32839600 32839600 PRJEB76780_P_NODE_12500_length_245_cov_0.906977_g12400_i0 PRJEB76780 12500 245 0.906977 2.22209365 PVC group 1783257 Bacteria Bacteria 59.7 3.51e-8   NR HMF76292.1 2212468 g12400 i0 36.9 7.66530612244898 84 45 94.3 3 236 6 79 161 HMF76292.1 GMC family oxidoreductase N-terminal domain-containing protein [Bryobacteraceae bacterium] diamond 1878 59.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;