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contig_metadata

20 rows where bioproject = "PRJEB76780", tax_kingdom = "Metazoa" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 20 ✖

tax_kingdom 1

  • Metazoa · 20 ✖

tax_clade 1

bioproject 1

  • PRJEB76780 · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3547012 3547012 PRJEB76780_P_NODE_3283_length_451_cov_1.211640_g3183_i0 PRJEB76780 3283 451 1.21164 5.4644964 Metazoa 33208 Nematoda Nematoda 295 3.32e-98   NR KHN74890.1 6265 g3183 i0 88 229.483370288248 150 18 99.8 0 450 1 89 238 KHN74890.1 Serine/threonine-protein phosphatase PP2A [Toxocara canis] diamond 103497 296 0.996621621621622 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
6099589 6099589 PRJEB76780_P_NODE_2465_length_522_cov_4.881960_g2365_i0 PRJEB76780 2465 522 4.88196 25.4838312 Pristionchus 54125 Nematoda Nematoda 154 1.36e-32   NTclustered gi|524845312|gb|KC819366.1| 1355913 g2365 i0 80.18 22.2816091954023 222 30 41 11 89 303 49 263 Pristionchus hoplostomus strain JU1090 subunit ribosomal protein 20 (rps-20) mRNA, partial cds blastn 11631 154 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus hoplostomus
6516939 6516939 PRJEB76780_P_NODE_666_length_998_cov_5.457297_g596_i0 PRJEB76780 666 998 5.457297 54.46382406 Meloidogyne graminicola 189291 Nematoda Nematoda 377 1.4699999999999999e-99   NTclustered gi|1377671584|gb|MF166622.1| 189291 g596 i0 80.903 0.487975951903808 487 85 48 5 348 827 271 756 Meloidogyne graminicola clone Mg4610 hypothetical protein mRNA, complete cds blastn 487 377 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
6516947 6516947 PRJEB76780_P_NODE_7706_length_291_cov_1.357798_g7606_i0 PRJEB76780 7706 291 1.357798 3.95119218 Metazoa 33208 Nematoda Nematoda 124 1.02e-30   NR KRX98865.1 6337 g7606 i0 70.5 8.6701030927835 95 25 96.9 3 3 284 31 123 KRX98865.1 putative aconitate hydratase, mitochondrial [Trichinella pseudospiralis] diamond 2523 125 0.992 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
11617276 11617276 PRJEB76780_P_NODE_2370_length_536_cov_5.717063_g2270_i0 PRJEB76780 2370 536 5.717063 30.64345768 Opisthokonta 33154 Nematoda Nematoda 216 1.9999999999999993e-68   NR KFD50978.1 68888 g2270 i0 71.6 16.8973880597015 148 42 82.8 0 526 83 51 198 KFD50978.1 hypothetical protein M513_08161, partial [Trichuris suis] diamond 9057 216 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris suis
11617304 11617304 PRJEB76780_P_NODE_5430_length_347_cov_1.671533_g5330_i0 PRJEB76780 5430 347 1.671533 5.80021951 Metazoa 33208 Nematoda Nematoda 159 1.1099999999999998e-47   NR ULT99372.1 6238 g5330 i0 86 170.740634005764 86 12 74.4 0 27 284 41 126 ULT99372.1 hypothetical protein L3Y34_000603 [Caenorhabditis briggsae] diamond 59247 159 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
16715463 16715463 PRJEB76780_P_NODE_3074_length_467_cov_6.741117_g2974_i0 PRJEB76780 3074 467 6.741117 31.48101639 Pristionchus pauli 376545 Nematoda Nematoda 281 5.32e-71   NTclustered gi|150982019|gb|EF634598.1| 376545 g2974 i0 80.939 4.34903640256959 362 63 77 6 63 421 37 395 Pristionchus pauli large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds blastn 2031 281 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus pauli
26773808 26773808 PRJEB76780_P_NODE_10501_length_252_cov_1.430168_g10401_i0 PRJEB76780 10501 252 1.430168 3.60402336 Opisthokonta 33154 Nematoda Nematoda 62.4 1.88e-9   NR TMS36011.1 34508 g10401 i0 61.7 7.59523809523809 47 17 56 1 6 146 173 218 TMS36011.1 hypothetical protein L596_003282 [Steinernema carpocapsae] diamond 1914 62.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Steinernematidae Steinernema Steinernema carpocapsae
27445349 27445349 PRJEB76780_P_NODE_1843_length_613_cov_1.311111_g1744_i0 PRJEB76780 1843 613 1.311111 8.03711043 Trichostrongylus colubriformis 6319 Nematoda Nematoda 145 3.83e-38   NR KAK5974013.1 6319 g1744 i0 41 6.24959216965742 212 113 99.8 4 613 2 162 369 KAK5974013.1 3-hydroxyisobutyryl-CoA hydrolase mitochondrial [Trichostrongylus colubriformis] diamond 3831 145 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Trichostrongylidae Trichostrongylus Trichostrongylus colubriformis
27476624 27476624 PRJEB76780_P_NODE_10643_length_252_cov_0.871508_g10543_i0 PRJEB76780 10643 252 0.871508 2.19620016 Pristionchus mayeri 1317129 Nematoda Nematoda 50.4 7.87e-5   NR GMR36589.1 1317129 g10543 i0 41.9 0.738095238095238 62 33 70.2 1 184 8 354 415 GMR36589.1 hypothetical protein PMAYCL1PPCAC_06784, partial [Pristionchus mayeri] diamond 186 50.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus mayeri
27887035 27887035 PRJEB76780_P_NODE_665_length_999_cov_2.077754_g595_i0 PRJEB76780 665 999 2.077754 20.75676246 Meloidogyne graminicola 189291 Nematoda Nematoda 78.2 2.08e-12   NR AVZ46778.1 189291 g595 i0 37.9 0.396396396396396 132 82 39.6 0 424 29 110 241 AVZ46778.1 hypothetical protein [Meloidogyne graminicola] diamond 396 78.2 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
28826837 28826837 PRJEB76780_P_NODE_9808_length_259_cov_1.672043_g9708_i0 PRJEB76780 9808 259 1.672043 4.33059137 Aphelenchoides 90723 Nematoda Nematoda 67 1.33e-10   NR KAI6171470.1 293665 g9708 i0 52.9 1.42471042471042 68 26 71.8 1 196 11 4 71 KAI6171470.1 hypothetical protein M3Y97_01048000 [Aphelenchoides bicaudatus] diamond 369 67 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides bicaudatus
30002809 30002809 PRJEB76780_P_NODE_10231_length_253_cov_1.388889_g10131_i0 PRJEB76780 10231 253 1.388889 3.51388917 Mesorhabditis belari 2138241 Nematoda Nematoda 58.5 1.15e-7   NR CAJ0950752.1 2138241 g10131 i0 50 2.15810276679842 56 28 66.4 0 184 17 21 76 CAJ0950752.1 unnamed protein product, partial [Mesorhabditis belari] diamond 546 58.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Mesorhabditis Mesorhabditis belari
30027091 30027091 PRJEB76780_P_NODE_11411_length_249_cov_0.886364_g11311_i0 PRJEB76780 11411 249 0.886364 2.20704636 Rhabditida 6236 Nematoda Nematoda 62 6.66e-9   NR XP_020305783.1 7209 g11311 i0 50.9 1.96385542168675 57 28 68.7 0 171 1 139 195 XP_020305783.1 La domain-containing protein [Loa loa] diamond 489 62 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Loa Loa loa
30255744 30255744 PRJEB76780_P_NODE_9672_length_261_cov_1.244681_g9572_i0 PRJEB76780 9672 261 1.244681 3.24861741 Heterodera schachtii 97005 Nematoda Nematoda 65.9 2.64e-10   NR KAL3068799.1 97005 g9572 i0 41.8 1.1264367816092 98 43 97.7 3 259 5 151 247 KAL3068799.1 hypothetical protein niasHS_017365 [Heterodera schachtii] diamond 294 65.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera schachtii
30666087 30666087 PRJEB76780_P_NODE_8913_length_272_cov_1.175879_g8813_i0 PRJEB76780 8913 272 1.175879 3.19839088 Auanema sp. JU1783 2878363 Nematoda Nematoda 95.9 1.06e-20   NR CAI4231966.1 2878363 g8813 i0 59.3 3.86029411764706 91 34 98.2 2 269 3 141 230 CAI4231966.1 unnamed protein product [Auanema sp. JU1783] diamond 1050 95.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Auanema Auanema sp. JU1783
30761017 30761017 PRJEB76780_P_NODE_10114_length_255_cov_1.285714_g10014_i0 PRJEB76780 10114 255 1.285714 3.2785707 Ditylenchus destructor 166010 Nematoda Nematoda 95.1 1.56e-20   NR KAI1722464.1 166010 g10014 i0 65.6 2.91764705882353 64 22 75.3 0 196 5 470 533 KAI1722464.1 histone deacetylase domain-containing protein [Ditylenchus destructor] diamond 744 95.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
31733517 31733517 PRJEB76780_P_NODE_1717_length_632_cov_2.085868_g1620_i0 PRJEB76780 1717 632 2.085868 13.18268576 Metazoa 33208 Nematoda Nematoda 232 4.56e-74   NR AXS78234.1 6269 g1620 i0 96.5 61.2199367088608 115 4 54.6 0 346 2 1 115 AXS78234.1 ras-related protein rab-1a [Anisakis simplex] diamond 38691 234 0.991452991452991 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
31994051 31994051 PRJEB76780_P_NODE_11478_length_249_cov_0.886364_g11378_i0 PRJEB76780 11478 249 0.886364 2.20704636 Auanema sp. JU1783 2878363 Nematoda Nematoda 48.9 2.69e-4   NR CAI4223838.1 2878363 g11378 i0 32.3 0.783132530120482 65 40 73.5 1 27 209 311 375 CAI4223838.1 unnamed protein product [Auanema sp. JU1783] diamond 195 48.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Auanema Auanema sp. JU1783
32184008 32184008 PRJEB76780_P_NODE_4058_length_405_cov_1.644578_g3958_i0 PRJEB76780 4058 405 1.644578 6.6605409 Loa loa 7209 Nematoda Nematoda 45.1 0.0207   NR XP_020301776.1 7209 g3958 i0 39.6 0.392592592592593 53 29 37 1 256 405 108 160 XP_020301776.1 hypothetical protein LOAG_09909 [Loa loa] diamond 159 45.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Onchocercidae Loa Loa loa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;