RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB76780", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJEB76780 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24364559 24364559 PRJEB76780_P_NODE_1940_length_595_cov_6.586207_g1841_i0 PRJEB76780 1940 595 6.586207 39.18793165 Rozella allomycis CSF55 988480 Fungi Fungi 261 1.26e-85   NR EPZ31448.1 988480 g1841 i0 66.3 5.96470588235294 202 59 97.3 2 580 2 1 202 EPZ31448.1 40S ribosomal protein S8-B [Rozella allomycis CSF55] diamond 3549 261 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
26781166 26781166 PRJEB76780_P_NODE_8961_length_271_cov_1.883838_g8861_i0 PRJEB76780 8961 271 1.883838 5.10520098 Rozella allomycis CSF55 988480 Fungi Fungi 145 8.02e-39   NR RKP16699.1 988480 g8861 i0 71.1 0.996309963099631 90 26 99.6 0 271 2 279 368 RKP16699.1 glucose-6-phosphate isomerase, partial [Rozella allomycis CSF55] diamond 270 145 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;