RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB76780", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJEB76780 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3964943 3964943 PRJEB76780_P_NODE_6664_length_312_cov_1.497908_g6564_i0 PRJEB76780 6664 312 1.497908 4.67347296 Bacteria 2 Bacteria Bacteria 127 1.08e-33   NR WP_184201702.1 685828 g6564 i0 68 5.59615384615385 97 31 93.3 0 18 308 2 98 WP_184201702.1 glucose 1-dehydrogenase [Armatimonas rosea] diamond 1746 128 0.9921875 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea
28234163 28234163 PRJEB76780_P_NODE_1926_length_599_cov_1.606464_g1827_i0 PRJEB76780 1926 599 1.606464 9.62271936 Armatimonadota bacterium 2033014 Bacteria Bacteria 56.6 1.15e-6   NR HEY3378629.1 2033014 g1827 i0 45.9 0.30550918196995003 61 33 30.6 0 520 338 25 85 HEY3378629.1 ankyrin repeat domain-containing protein [Armatimonadota bacterium] diamond 183 56.6 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;