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contig_metadata

9 rows where bioproject = "PRJEB76780", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 9 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 9 ✖

bioproject 1

  • PRJEB76780 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16715421 16715421 PRJEB76780_P_NODE_12374_length_245_cov_1.796512_g12274_i0 PRJEB76780 12374 245 1.796512 4.4014544 Verrucomicrobiota 74201 Bacteria Bacteria 143 1.16e-38   NR MBL9213920.1 2006848 g12274 i0 86.4 29.669387755102 81 11 99.2 0 243 1 223 303 MBL9213920.1 aminotransferase class III-fold pyridoxal phosphate-dependent enzyme [Opitutaceae bacterium] diamond 7269 144 0.993055555555556 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
26837227 26837227 PRJEB76780_P_NODE_5861_length_334_cov_1.494253_g5761_i0 PRJEB76780 5861 334 1.494253 4.99080502 Bacteria 2 Bacteria Bacteria 80.1 1.42e-16   NR MDO8540592.1 2006848 g5761 i0 39.2 2.53293413173653 97 56 87.1 2 291 1 3 96 MDO8540592.1 DUF302 domain-containing protein [Opitutaceae bacterium] diamond 846 80.1 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
26868938 26868938 PRJEB76780_P_NODE_8181_length_283_cov_1.485714_g8081_i0 PRJEB76780 8181 283 1.485714 4.20457062 Pseudomonadati 3379134 Bacteria Bacteria 100 2.69e-22   NR MBP8014419.1 2026799 g8081 i0 57.4 7.96113074204947 94 40 99.6 0 2 283 85 178 MBP8014419.1 hydroxylamine reductase [Verrucomicrobiota bacterium] diamond 2253 100 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
27824116 27824116 PRJEB76780_P_NODE_1124_length_780_cov_1.493635_g1036_i0 PRJEB76780 1124 780 1.493635 11.650353 Luteolibacter rhizosphaerae 2989719 Bacteria Bacteria 128 1.2699999999999998e-31   NR WP_264511378.1 2989719 g1036 i0 52.2 0.530769230769231 138 59 53.1 1 415 2 7 137 WP_264511378.1 DUF4394 domain-containing protein [Luteolibacter rhizosphaerae] diamond 414 128 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter rhizosphaerae
27855477 27855477 PRJEB76780_P_NODE_12605_length_245_cov_0.906977_g12505_i0 PRJEB76780 12605 245 0.906977 2.22209365 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 64.7 2.13e-10   NR NNE92924.1 2026801 g12505 i0 48.1 1.26122448979592 54 28 66.1 0 223 62 69 122 NNE92924.1 superoxide dismutase family protein [Verrucomicrobiales bacterium] diamond 309 64.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
28329060 28329060 PRJEB76780_P_NODE_7226_length_301_cov_0.864035_g7126_i0 PRJEB76780 7226 301 0.864035 2.60074535 Chthoniobacteraceae bacterium 2811408 Bacteria Bacteria 47.4 5.82e-4   NR HEX4085711.1 2811408 g7126 i0 40 0.498338870431894 50 29 48.8 1 137 283 45 94 HEX4085711.1 hypothetical protein [Chthoniobacteraceae bacterium] diamond 150 47.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales Chthoniobacteraceae   Chthoniobacteraceae bacterium
29908046 29908046 PRJEB76780_P_NODE_7031_length_305_cov_1.008621_g6931_i0 PRJEB76780 7031 305 1.008621 3.07629405 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 65.5 8.01e-10   NR MEK7782269.1 2026799 g6931 i0 53.1 2.53770491803279 64 28 63 1 193 2 487 548 MEK7782269.1 glycoside hydrolase family 3 N-terminal domain-containing protein [Verrucomicrobiota bacterium] diamond 774 65.5 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
30539727 30539727 PRJEB76780_P_NODE_13193_length_242_cov_1.710059_g13093_i0 PRJEB76780 13193 242 1.710059 4.13834278 Chthoniobacterales bacterium 2201154 Bacteria Bacteria 44.3 0.0102   NR MFL6529243.1 2201154 g13093 i0 33.3 1.26446280991736 51 34 63.2 0 154 2 182 232 MFL6529243.1 chromate efflux transporter [Chthoniobacterales bacterium] diamond 306 44.3 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Spartobacteria Chthoniobacterales     Chthoniobacterales bacterium
32776652 32776652 PRJEB76780_P_NODE_8280_length_281_cov_2.807692_g8180_i0 PRJEB76780 8280 281 2.807692 7.88961452 Bacteria 2 Bacteria Bacteria 43.9 0.00986   NR MFP4674096.1 2026772 g8180 i0 35.2 3.75800711743772 54 35 57.7 0 183 22 52 105 MFP4674096.1 hypothetical protein [Opitutales bacterium] diamond 1056 44.3 0.99097065462754 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;