RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB76780", tax_clade = "PVC group" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJEB76780 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31234741 31234741 PRJEB76780_P_NODE_12715_length_244_cov_0.912281_g12615_i0 PRJEB76780 12715 244 0.912281 2.22596564 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 46.6 0.00164   NR MBU2437270.1 2035772 g12615 i0 32.5 6.88524590163934 80 41 93.4 3 15 242 635 705 MBU2437270.1 PKD domain-containing protein [Candidatus Omnitrophota bacterium] diamond 1680 46.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31393220 31393220 PRJEB76780_P_NODE_11396_length_249_cov_0.886364_g11296_i0 PRJEB76780 11396 249 0.886364 2.20704636 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 53.1 3.41e-6   NR NPU98565.1 2035772 g11296 i0 41.1 0.674698795180723 56 28 62.7 2 157 2 1 55 NPU98565.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 168 53.1 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;