RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB76780", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJEB76780 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27192132 27192132 PRJEB76780_P_NODE_3222_length_455_cov_1.630890_g3122_i0 PRJEB76780 3222 455 1.63089 7.4205495 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 136 7.66e-36   NR MCX7875137.1 2614255 g3122 i0 48 2.55164835164835 125 65 82.4 0 9 383 176 300 MCX7875137.1 fatty acid desaturase [Melioribacteraceae bacterium] diamond 1161 136 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium
30097321 30097321 PRJEB76780_P_NODE_8932_length_272_cov_1.005025_g8832_i0 PRJEB76780 8932 272 1.005025 2.733668 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 53.9 5.95e-6   NR MEJ2617514.1 2651163 g8832 i0 38.4 1.89705882352941 86 46 94.9 3 2 259 124 202 MEJ2617514.1 choice-of-anchor D domain-containing protein [Ignavibacteriaceae bacterium] diamond 516 53.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;