RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB76780", tax_clade = "FCB group" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJEB76780 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2688881 2688881 PRJEB76780_P_NODE_7043_length_304_cov_2.025974_g6943_i0 PRJEB76780 7043 304 2.025974 6.15896096 Fibrobacter sp. 35828 Bacteria Bacteria 110 4.03e-26   NR NLL12130.1 35828 g6943 i0 69.6 4.58881578947368 79 22 78 1 238 2 6 82 NLL12130.1 UDP-glucose 6-dehydrogenase [Fibrobacter sp.] diamond 1395 110 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.
27571341 27571341 PRJEB76780_P_NODE_3064_length_468_cov_3.443038_g2964_i0 PRJEB76780 3064 468 3.443038 16.11341784 Chitinivibrionales bacterium 2663014 Bacteria Bacteria 56.6 4.59e-6   NR MBD3345689.1 2663014 g2964 i0 45.5 0.634615384615385 99 51 62.2 3 3 293 100 197 MBD3345689.1 hypothetical protein [Chitinivibrionales bacterium] diamond 297 56.6 1 Bacteria FCB group Pseudomonadati Fibrobacterota Chitinivibrionia Chitinivibrionales     Chitinivibrionales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;