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contig_metadata

17 rows where bioproject = "PRJEB76780" and tax_clade = "Apusozoa"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Apusozoa · 17 ✖

bioproject 1

  • PRJEB76780 · 17 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
138732 138732 PRJEB76780_P_NODE_4421_length_387_cov_1.238854_g4321_i0 PRJEB76780 4421 387 1.238854 4.79436498 Thecamonas trahens 529818 Root_unresolved Root_unresolved 189 2.7e-43   NTclustered gi|923126900|ref|XM_013901463.1| 461836 g4321 i0 79.336 3.87855297157623 271 54 70 2 118 387 994 1263 Thecamonas trahens ATCC 50062 serine/threonine-protein phosphatase 2A regulatory subunit pppA (AMSG_06862), partial mRNA blastn 1501 189 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
1413388 1413388 PRJEB76780_P_NODE_2122_length_569_cov_6.885081_g2022_i0 PRJEB76780 2122 569 6.885081 39.17611089 Thecamonas trahens 529818 Root_unresolved Root_unresolved 207 1.13e-48   NTclustered gi|923125359|ref|XM_013900694.1| 461836 g2022 i0 81.712 9.5817223198594 257 39 44 6 195 447 277 529 Thecamonas trahens ATCC 50062 calmodulin (AMSG_07687), mRNA blastn 5452 207 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
11617306 11617306 PRJEB76780_P_NODE_550_length_1080_cov_4.658391_g491_i0 PRJEB76780 550 1080 4.658391 50.3106228 Thecamonas trahens 529818 Root_unresolved Root_unresolved 431 1.2099999999999999e-115   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g491 i0 77.007 15.5962962962963 822 145 74 31 160 959 997 198 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 16844 431 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
23090759 23090759 PRJEB76780_P_NODE_839_length_903_cov_4.239759_g761_i0 PRJEB76780 839 903 4.239759 38.28502377 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 361 2.05e-121   NR XP_013760592.1 461836 g761 i0 66.1 0.930232558139535 280 90 92 3 1 831 63 340 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 840 361 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26970822 26970822 PRJEB76780_P_NODE_12022_length_247_cov_0.896552_g11922_i0 PRJEB76780 12022 247 0.896552 2.21448344 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 48.5 3.49e-4   NR XP_013753357.1 461836 g11922 i0 52.8 0.437246963562753 36 17 43.7 0 110 3 215 250 XP_013753357.1 calmodulin [Thecamonas trahens ATCC 50062] diamond 108 48.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27058590 27058590 PRJEB76780_P_NODE_4042_length_406_cov_1.405405_g3942_i0 PRJEB76780 4042 406 1.405405 5.7059443 root 1 Root_unresolved Root_unresolved 84.7 1.24e-16   NR XP_013761608.1 461836 g3942 i0 50 2.79310344827586 80 39 58.4 1 260 24 53 132 XP_013761608.1 uncharacterized protein AMSG_01558 [Thecamonas trahens ATCC 50062] diamond 1134 85.1 0.995299647473561 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27382021 27382021 PRJEB76780_P_NODE_4703_length_374_cov_2.003322_g4603_i0 PRJEB76780 4703 374 2.003322 7.49242428 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 106 2.78e-27   NR XP_013753308.1 461836 g4603 i0 59.5 0.67379679144385 84 34 67.4 0 64 315 9 92 XP_013753308.1 cystatin-B thiol proteinase inhibitor [Thecamonas trahens ATCC 50062] diamond 252 106 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27729606 27729606 PRJEB76780_P_NODE_2924_length_481_cov_1.406863_g2824_i0 PRJEB76780 2924 481 1.406863 6.76701103 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 47 0.0102   NR XP_013759479.1 461836 g2824 i0 53.8 0.324324324324324 52 23 31.8 1 433 281 1 52 XP_013759479.1 uncharacterized protein AMSG_02572 [Thecamonas trahens ATCC 50062] diamond 156 47 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28297490 28297490 PRJEB76780_P_NODE_6006_length_330_cov_0.894942_g5906_i0 PRJEB76780 6006 330 0.894942 2.9533086 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 46.2 9.28e-4   NR XP_013760674.1 461836 g5906 i0 28.1 1.67272727272727 96 67 87.3 1 33 320 1 94 XP_013760674.1 uncharacterized protein AMSG_02833 [Thecamonas trahens ATCC 50062] diamond 552 46.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28802490 28802490 PRJEB76780_P_NODE_2068_length_578_cov_2.776238_g1969_i0 PRJEB76780 2068 578 2.776238 16.04665564 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 103 2.99e-24   NR XP_013758370.1 461836 g1969 i0 40.3 0.773356401384083 149 81 77.3 2 549 103 8 148 XP_013758370.1 uncharacterized protein AMSG_04698 [Thecamonas trahens ATCC 50062] diamond 447 103 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28897369 28897369 PRJEB76780_P_NODE_5028_length_362_cov_1.349481_g4928_i0 PRJEB76780 5028 362 1.349481 4.88512122 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 48.5 0.00126   NR XP_013758283.1 461836 g4928 i0 40.6 0.530386740331492 64 38 53 0 238 47 28 91 XP_013758283.1 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Thecamonas trahens ATCC 50062] diamond 192 48.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30634378 30634378 PRJEB76780_P_NODE_12533_length_245_cov_0.906977_g12433_i0 PRJEB76780 12533 245 0.906977 2.22209365 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 47.8 6.75e-4   NR XP_013763169.1 461836 g12433 i0 43.8 0.783673469387755 64 34 78.4 2 204 13 1042 1103 XP_013763169.1 uncharacterized protein AMSG_00313 [Thecamonas trahens ATCC 50062] diamond 192 47.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30761029 30761029 PRJEB76780_P_NODE_7074_length_304_cov_1.000000_g6974_i0 PRJEB76780 7074 304 1 3.04 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 136 9.47e-35   NR XP_013760369.1 461836 g6974 i0 63.3 7.76644736842105 98 36 96.7 0 3 296 198 295 XP_013760369.1 threonyl-tRNA synthetase [Thecamonas trahens ATCC 50062] diamond 2361 136 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31962365 31962365 PRJEB76780_P_NODE_1918_length_600_cov_1.347249_g1819_i0 PRJEB76780 1918 600 1.347249 8.083494 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 75.1 7.35e-12   NR XP_013762572.1 461836 g1819 i0 32.4 0.94 188 106 92 8 27 578 265 435 XP_013762572.1 superoxide dismutase [Thecamonas trahens ATCC 50062] diamond 564 75.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32025759 32025759 PRJEB76780_P_NODE_5078_length_360_cov_1.358885_g4978_i0 PRJEB76780 5078 360 1.358885 4.891986 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 95.5 1.19e-21   NR XP_013752724.1 461836 g4978 i0 42.5 0.941666666666667 113 65 94.2 0 21 359 9 121 XP_013752724.1 dual specificity protein phosphatase [Thecamonas trahens ATCC 50062] diamond 339 95.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32057306 32057306 PRJEB76780_P_NODE_3558_length_434_cov_1.121884_g3458_i0 PRJEB76780 3558 434 1.121884 4.86897656 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 48.5 0.00252   NR XP_013754178.1 461836 g3458 i0 34.7 0.497695852534562 72 46 49.1 1 412 200 447 518 XP_013754178.1 uncharacterized protein AMSG_09624 [Thecamonas trahens ATCC 50062] diamond 216 48.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32310787 32310787 PRJEB76780_P_NODE_5219_length_354_cov_2.807829_g5119_i0 PRJEB76780 5219 354 2.807829 9.93971466 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 93.6 1.22e-19   NR XP_013760602.1 461836 g5119 i0 48.4 0.805084745762712 95 47 79.7 2 22 303 91 184 XP_013760602.1 transcription factor lim1, variant [Thecamonas trahens ATCC 50062] diamond 285 93.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;