RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where bioproject = "PRJEB7614", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 5 ✖

tax_clade 1

bioproject 1

  • PRJEB7614 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19264233 19264233 PRJEB7614_P_NODE_976_length_326_cov_389797.838384_g911_i0 PRJEB7614 976 326 389797.838384 1270740.95313184 Eimeria paludosa 1497015 SAR_Eukaryotes SAR_Eukaryotes 104 8.34e-18   NTclustered gi|653601277|gb|KJ767188.1| 1497015 g911 i0 88.043 23.4631901840491 92 6 28 5 109 199 330 243 Eimeria paludosa isolate DMH01 28S ribosomal RNA gene, partial sequence blastn 7649 104 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria paludosa
25661660 25661660 PRJEB7614b_S_NODE_98_length_397_cov_34208.776243_g96_i0 PRJEB7614 98 397 34208.776243 135808.84168471 Eimeria paludosa 1497015 SAR_Eukaryotes SAR_Eukaryotes 104 1.03e-17   NTclustered gi|653601277|gb|KJ767188.1| 1497015 g96 i0 88.043 15.1511335012594 92 6 23 5 89 179 330 243 Eimeria paludosa isolate DMH01 28S ribosomal RNA gene, partial sequence blastn 6015 104 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria paludosa
26069955 26069955 PRJEB7614d_S_NODE_309_length_327_cov_16.530822_g271_i0 PRJEB7614 309 327 16.530822 54.05578794 Eimeria paludosa 1497015 SAR_Eukaryotes SAR_Eukaryotes 104 8.37e-18   NTclustered gi|653601277|gb|KJ767188.1| 1497015 g271 i0 88.043 3.75840978593272 92 6 28 5 190 280 243 330 Eimeria paludosa isolate DMH01 28S ribosomal RNA gene, partial sequence blastn 1229 104 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria paludosa
26342051 26342051 PRJEB7614b_S_NODE_527_length_262_cov_54548.709251_g525_i0 PRJEB7614 527 262 54548.709251 142917.61823762 Eimeria paludosa 1497015 SAR_Eukaryotes SAR_Eukaryotes 104 6.51e-18   NTclustered gi|653601277|gb|KJ767188.1| 1497015 g525 i0 88.043 22.6297709923664 92 6 35 5 89 179 330 243 Eimeria paludosa isolate DMH01 28S ribosomal RNA gene, partial sequence blastn 5929 104 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria paludosa
26478309 26478309 PRJEB7614b_S_NODE_6912_length_156_cov_1.933884_g6910_i0 PRJEB7614 6912 156 1.933884 3.01685904 Toxoplasma gondii ME49 508771 SAR_Eukaryotes SAR_Eukaryotes 139 9.59e-29   NTclustered gi|1085197446|ref|XR_001974451.1| 508771 g6910 i0 88.235 6.12179487179487 119 11 75 3 31 147 61 178 Toxoplasma gondii ME49 28S ribosomal RNA rRNA blastn 955 139 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;