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contig_metadata

26 rows where bioproject = "PRJEB7614" and tax_clade = "Sar"

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tax_phylum 4

tax_superkingdom 1

tax_clade 1

  • Sar · 26 ✖

bioproject 1

  • PRJEB7614 · 26 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16715378 16715378 PRJEB7614_P_NODE_1374_length_296_cov_17.108614_g1307_i0 PRJEB7614 1374 296 17.108614 50.64149744 uncultured dinophysoid 566560 SAR_Eukaryotes SAR_Eukaryotes 128 4.44e-25   NTclustered gi|209871038|gb|EU786725.1| 566560 g1307 i0 78.974 60.4459459459459 195 35 65 6 77 268 1305 1114 Uncultured dinophysoid isolate Gs1a_38 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17892 128 1 Eukaryota Sar     Dinophyceae Dinophysales Dinophysaceae   uncultured dinophysoid
18848119 18848119 PRJEB7614_P_NODE_2235_length_252_cov_310823.466368_g2168_i0 PRJEB7614 2235 252 310823.466368 783275.13524736 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 270 5.7999999999999984e-68   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2168 i0 98.065 48.6428571428571 155 3 62 0 12 166 2649 2495 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 12258 270 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
19264233 19264233 PRJEB7614_P_NODE_976_length_326_cov_389797.838384_g911_i0 PRJEB7614 976 326 389797.838384 1270740.95313184 Eimeria paludosa 1497015 SAR_Eukaryotes SAR_Eukaryotes 104 8.34e-18   NTclustered gi|653601277|gb|KJ767188.1| 1497015 g911 i0 88.043 23.4631901840491 92 6 28 5 109 199 330 243 Eimeria paludosa isolate DMH01 28S ribosomal RNA gene, partial sequence blastn 7649 104 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria paludosa
20539640 20539640 PRJEB7614_P_NODE_1857_length_268_cov_21.962343_g1790_i0 PRJEB7614 1857 268 21.962343 58.85907924 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 370 5.96e-98   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g1790 i0 93.254 9.17910447761194 252 15 94 2 5 255 112 362 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 2460 370 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
20539652 20539652 PRJEB7614_P_NODE_517_length_383_cov_2.378531_g459_i0 PRJEB7614 517 383 2.378531 9.10977373 uncultured Syndiniales 385043 SAR_Eukaryotes SAR_Eukaryotes 76.8 2.17e-9   NTclustered gi|194032323|gb|EU785193.1| 385043 g459 i0 78.814 0.626631853785901 118 21 30 4 97 212 232 117 Uncultured syndiniales clone RA2-A5 18S ribosomal RNA gene, partial sequence blastn 240 76.8 1 Eukaryota Sar     Dinophyceae Syndiniales     uncultured Syndiniales
21815427 21815427 PRJEB7614_P_NODE_1938_length_264_cov_494922.119149_g1871_i0 PRJEB7614 1938 264 494922.119149 1306594.39455336 Developayella elegans 42750 SAR_Eukaryotes SAR_Eukaryotes 180 1.06e-40   NTclustered gi|223029652|gb|FJ030882.1| 42750 g1871 i0 84.574 64.375 188 21 70 7 2 185 325 142 Developayella elegans strain CCAP1917/1 28S ribosomal RNA gene, partial sequence blastn 16995 180 1 Eukaryota Sar     Developea   Developayellaceae Developayella Developayella elegans
22673332 22673332 PRJEB7614_P_NODE_10018_length_154_cov_1.680000_g9951_i0 PRJEB7614 10018 154 1.68 2.5872 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 172 9.3e-39   NTclustered gi|220983374|dbj|AB453010.1| 467061 g9951 i0 98.958 62.1428571428571 96 1 62 0 59 154 1881 1786 Chlorarachniophyceae sp. P329 gene for nuclear large subunit ribosomal RNA, partial sequence blastn 9570 172 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae       Chlorarachniophyceae sp. P329
23948865 23948865 PRJEB7614_P_NODE_2419_length_246_cov_5.262673_g2352_i0 PRJEB7614 2419 246 5.262673 12.94617558 Cercomonas 45109 SAR_Eukaryotes SAR_Eukaryotes 185 2.1e-42   NTclustered gi|161015710|gb|EF681944.1| 458870 g2352 i0 98.113 58.4105691056911 106 2 43 0 17 122 228 123 Cercomonas sp. HFCC543 28S ribosomal RNA gene, partial sequence blastn 14369 185 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC543
25661660 25661660 PRJEB7614b_S_NODE_98_length_397_cov_34208.776243_g96_i0 PRJEB7614 98 397 34208.776243 135808.84168471 Eimeria paludosa 1497015 SAR_Eukaryotes SAR_Eukaryotes 104 1.03e-17   NTclustered gi|653601277|gb|KJ767188.1| 1497015 g96 i0 88.043 15.1511335012594 92 6 23 5 89 179 330 243 Eimeria paludosa isolate DMH01 28S ribosomal RNA gene, partial sequence blastn 6015 104 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria paludosa
25661663 25661663 PRJEB7614c_S_NODE_66_length_414_cov_7.313984_g65_i0 PRJEB7614 66 414 7.313984 30.27989376 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 558 1.92e-154   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g65 i0 94.49 47.6980676328502 363 18 87 2 21 382 1 362 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 19747 558 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
25661665 25661665 PRJEB7614d_S_NODE_1890_length_183_cov_16.520270_g1852_i0 PRJEB7614 1890 183 16.52027 30.2320941 Protoopalina limnocharis 2663001 SAR_Eukaryotes SAR_Eukaryotes 93.5 9.18e-15   NTclustered gi|1958638510|gb|MN638759.1| 2663001 g1852 i0 85.393 6.53551912568306 89 13 49 0 60 148 100 12 Protoopalina limnocharis isolate PLFL1 large subunit ribosomal RNA gene, partial sequence blastn 1196 93.5 1 Eukaryota Sar     Bigyra Opalinata Opalinidae Protoopalina Protoopalina limnocharis
25797720 25797720 PRJEB7614b_S_NODE_1819_length_186_cov_22.185430_g1817_i0 PRJEB7614 1819 186 22.18543 41.2648998 Protoopalina limnocharis 2663001 SAR_Eukaryotes SAR_Eukaryotes 93.5 9.37e-15   NTclustered gi|1958638510|gb|MN638759.1| 2663001 g1817 i0 85.393 6.43010752688172 89 13 48 0 64 152 100 12 Protoopalina limnocharis isolate PLFL1 large subunit ribosomal RNA gene, partial sequence blastn 1196 93.5 1 Eukaryota Sar     Bigyra Opalinata Opalinidae Protoopalina Protoopalina limnocharis
25888354 25888354 PRJEB7614a_S_NODE_85731_length_204_cov_4.733728_g84527_i0 PRJEB7614 85731 204 4.733728 9.65680512 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 372 1.2e-98   NTclustered gi|1837628855|gb|MN158348.1| 5909 g84527 i0 99.51 87.5588235294118 204 1 100 0 1 204 2735 2938 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 17862 372 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
25888365 25888365 PRJEB7614b_S_NODE_9955_length_151_cov_2.077586_g9953_i0 PRJEB7614 9955 151 2.077586 3.13715486 Cercomonadidae 45108 SAR_Eukaryotes SAR_Eukaryotes 279 5.19e-71   NTclustered gi|1695780|gb|U42448.1|CAU42448 45110 g9953 i0 100 100.35761589404 151 0 100 0 1 151 360 210 Cercomonas ATCC50316 18S ribosomal RNA gene, complete sequence blastn 15154 279 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. ATCC 50316
26024668 26024668 PRJEB7614a_S_NODE_77988_length_215_cov_13.277778_g76784_i0 PRJEB7614 77988 215 13.277778 28.5472227 Cercomonas 45109 SAR_Eukaryotes SAR_Eukaryotes 326 1.01e-84   NTclustered gi|161015708|gb|EF681942.1| 458868 g76784 i0 93.953 97.553488372093 215 13 100 0 1 215 267 53 Cercomonas sp. HFCC540 28S ribosomal RNA gene, partial sequence blastn 20974 326 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC540
26069928 26069928 PRJEB7614a_S_NODE_62893_length_242_cov_4.961353_g61689_i0 PRJEB7614 62893 242 4.961353 12.00647426 Cercomonas sp. 1979794 SAR_Eukaryotes SAR_Eukaryotes 128 3.52e-25   NTclustered gi|2651357794|gb|PP174308.1| 1979794 g61689 i0 82.278 75.702479338843 158 19 65 7 39 195 3830 3681 Cercomonas sp. isolate JGP5 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18320 128 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp.
26069942 26069942 PRJEB7614b_S_NODE_117_length_382_cov_33606.259366_g115_i0 PRJEB7614 117 382 33606.259366 128375.91077812 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 436 8.61e-118   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g115 i0 93.537 18.6020942408377 294 17 77 2 77 369 362 70 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 7106 436 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
26069955 26069955 PRJEB7614d_S_NODE_309_length_327_cov_16.530822_g271_i0 PRJEB7614 309 327 16.530822 54.05578794 Eimeria paludosa 1497015 SAR_Eukaryotes SAR_Eukaryotes 104 8.37e-18   NTclustered gi|653601277|gb|KJ767188.1| 1497015 g271 i0 88.043 3.75840978593272 92 6 28 5 190 280 243 330 Eimeria paludosa isolate DMH01 28S ribosomal RNA gene, partial sequence blastn 1229 104 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria paludosa
26160819 26160819 PRJEB7614a_S_NODE_127853_length_160_cov_1.912000_g126649_i0 PRJEB7614 127853 160 1.912 3.0592 root 1 Root_unresolved Root_unresolved 291 2.5799999999999998e-74   NTclustered gi|10832|emb|X54512.1| 5911 g126649 i0 99.375 95.7125 160 1 100 0 1 160 8308 8149 T. thermophila rdn A+ gene for pre-RNA, 17S rRNA, 5.8S rRNA, 26S rRNA blastn 15314 291 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
26206226 26206226 PRJEB7614c_S_NODE_1174_length_204_cov_2.485207_g1173_i0 PRJEB7614 1174 204 2.485207 5.06982228 Developayella elegans 42750 SAR_Eukaryotes SAR_Eukaryotes 187 4.68e-43   NTclustered gi|223029652|gb|FJ030882.1| 42750 g1173 i0 86.628 67.2009803921569 172 19 83 4 3 172 333 164 Developayella elegans strain CCAP1917/1 28S ribosomal RNA gene, partial sequence blastn 13709 187 1 Eukaryota Sar     Developea   Developayellaceae Developayella Developayella elegans
26206242 26206242 PRJEB7614e_S_NODE_2446_length_199_cov_4.603659_g2438_i0 PRJEB7614 2446 199 4.603659 9.16128141 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 291 3.3599999999999998e-74   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2438 i0 93 5.98492462311558 200 12 100 2 1 199 147 345 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 1191 291 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
26296598 26296598 PRJEB7614b_S_NODE_1238_length_203_cov_3.982143_g1236_i0 PRJEB7614 1238 203 3.982143 8.08375029 Cercomonas 45109 SAR_Eukaryotes SAR_Eukaryotes 309 9.51e-80   NTclustered gi|161015710|gb|EF681944.1| 458870 g1236 i0 95.833 86.5911330049261 192 6 95 2 1 192 230 41 Cercomonas sp. HFCC543 28S ribosomal RNA gene, partial sequence blastn 17578 309 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC543
26342051 26342051 PRJEB7614b_S_NODE_527_length_262_cov_54548.709251_g525_i0 PRJEB7614 527 262 54548.709251 142917.61823762 Eimeria paludosa 1497015 SAR_Eukaryotes SAR_Eukaryotes 104 6.51e-18   NTclustered gi|653601277|gb|KJ767188.1| 1497015 g525 i0 88.043 22.6297709923664 92 6 35 5 89 179 330 243 Eimeria paludosa isolate DMH01 28S ribosomal RNA gene, partial sequence blastn 5929 104 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria paludosa
26342059 26342059 PRJEB7614c_S_NODE_1447_length_196_cov_5.173913_g1446_i0 PRJEB7614 1447 196 5.173913 10.14086948 Dysteria brasiliensis 497733 SAR_Eukaryotes SAR_Eukaryotes 152 1.6199999999999998e-32   NTclustered gi|1216628402|gb|KX099196.1| 497733 g1446 i0 81.095 1.75510204081633 201 28 100 7 1 196 67 262 Dysteria brasiliensis clone DB3 28S ribosomal RNA gene, partial sequence blastn 344 152 1 Eukaryota Sar   Ciliophora Phyllopharyngea Dysteriida Dysteriidae Dysteria Dysteria brasiliensis
26478309 26478309 PRJEB7614b_S_NODE_6912_length_156_cov_1.933884_g6910_i0 PRJEB7614 6912 156 1.933884 3.01685904 Toxoplasma gondii ME49 508771 SAR_Eukaryotes SAR_Eukaryotes 139 9.59e-29   NTclustered gi|1085197446|ref|XR_001974451.1| 508771 g6910 i0 88.235 6.12179487179487 119 11 75 3 31 147 61 178 Toxoplasma gondii ME49 28S ribosomal RNA rRNA blastn 955 139 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
26478329 26478329 PRJEB7614e_S_NODE_46184_length_150_cov_1.739130_g46176_i0 PRJEB7614 46184 150 1.73913 2.608695 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 278 1.85e-70   NTclustered gi|363498776|gb|JN662487.1| 120398 g46176 i0 100 99.9933333333333 150 0 100 0 1 150 170 319 Aphanomyces stellatus strain GF 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14999 278 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;