RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB7614", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJEB7614 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11199666 11199666 PRJEB7614_P_NODE_1689_length_276_cov_475351.105263_g1622_i0 PRJEB7614 1689 276 475351.105263 1311969.05052588 root 1 Root_unresolved Root_unresolved 71.3 7.01e-8   NTclustered gi|690021421|emb|LM529123.1| 174720 g1622 i0 97.619 26.4746376811594 42 0 25 1 31 71 1720 1679 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0003434 blastn 7307 71.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
25222545 25222545 PRJEB7614_P_NODE_3720_length_209_cov_22199.994444_g3653_i0 PRJEB7614 3720 209 22199.994444 46397.98838796 root 1 Root_unresolved Root_unresolved 58.4 3.94e-4   NTclustered gi|690021421|emb|LM529123.1| 174720 g3653 i0 100 15.5406698564593 31 0 15 0 177 207 1684 1714 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0003434 blastn 3248 58.4 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;