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contig_metadata

19 rows where bioproject = "PRJEB75230", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"

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tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 19 ✖

tax_kingdom 1

  • Pseudomonadati · 19 ✖

bioproject 1

  • PRJEB75230 · 19 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
136058 136058 PRJEB75230_P_NODE_132821_length_249_cov_0.875000_g132639_i0 PRJEB75230 132821 249 0.875 2.17875 Bacteria 2 Bacteria Bacteria 97.1 8.049999999999999e-23   NR MCB9072629.1 2026715 g132639 i0 64.1 3.10843373493976 64 23 77.1 0 247 56 148 211 MCB9072629.1 succinate dehydrogenase cytochrome b subunit [Pseudobdellovibrionaceae bacterium] diamond 774 97.4 0.996919917864476 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
4823981 4823981 PRJEB75230_P_NODE_173984_length_242_cov_0.911243_g173802_i0 PRJEB75230 173984 242 0.911243 2.20520806 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 115 1.24e-30   NR MES3037699.1 3034175 g173802 i0 65.4 1.93388429752066 78 27 96.7 0 8 241 56 133 MES3037699.1 potassium channel family protein [Bdellovibrionota bacterium] diamond 468 115 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
27034167 27034167 PRJEB75230_P_NODE_125362_length_250_cov_0.870056_g125180_i0 PRJEB75230 125362 250 0.870056 2.17514 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 98.2 2.25e-22   NR MCB0379076.1 2053517 g125180 i0 58 0.972 81 33 97.2 1 7 249 87 166 MCB0379076.1 formimidoylglutamase [Bdellovibrionales bacterium] diamond 243 98.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27761099 27761099 PRJEB75230_P_NODE_17644_length_397_cov_1.246914_g17462_i0 PRJEB75230 17644 397 1.246914 4.95024858 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 67 7.12e-10   NR MBS1969835.1 2053517 g17462 i0 31.4 1.05793450881612 140 80 99.7 3 396 1 741 872 MBS1969835.1 endonuclease/exonuclease/phosphatase family protein [Bdellovibrionales bacterium] diamond 420 67 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27981859 27981859 PRJEB75230_P_NODE_150525_length_246_cov_0.890173_g150343_i0 PRJEB75230 150525 246 0.890173 2.18982558 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 119 2.3e-31   NR MBA2405764.1 2053517 g150343 i0 71.3 0.975609756097561 80 23 97.6 0 243 4 118 197 MBA2405764.1 sulfite exporter TauE/SafE family protein [Bdellovibrionales bacterium] diamond 240 119 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28044882 28044882 PRJEB75230_P_NODE_133045_length_249_cov_0.875000_g132863_i0 PRJEB75230 133045 249 0.875 2.17875 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 45.4 0.00358   NR HEY8279653.1 3034175 g132863 i0 41.8 0.662650602409639 55 30 66.3 2 241 77 8 60 HEY8279653.1 hypothetical protein [Bdellovibrionota bacterium] diamond 165 45.4 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium
28076413 28076413 PRJEB75230_P_NODE_142605_length_247_cov_0.885057_g142423_i0 PRJEB75230 142605 247 0.885057 2.18609079 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 125 2.27e-32   NR MBY0518024.1 2081706 g142423 i0 72 1.9919028340081 82 23 99.6 0 247 2 92 173 MBY0518024.1 flagellar biosynthesis protein FlhB [Bacteriovoracaceae bacterium] diamond 492 125 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
28139948 28139948 PRJEB75230_P_NODE_93925_length_268_cov_1.482051_g93743_i0 PRJEB75230 93925 268 1.482051 3.97189668 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 52 2.67e-5   NR MBX2988612.1 2026715 g93743 i0 36.7 1.00746268656716 90 49 94 2 3 254 297 384 MBX2988612.1 glycosyltransferase family 9 protein [Pseudobdellovibrionaceae bacterium] diamond 270 52 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
28297472 28297472 PRJEB75230_P_NODE_65786_length_293_cov_1.159091_g65604_i0 PRJEB75230 65786 293 1.159091 3.39613663 Oligoflexaceae bacterium 2957744 Bacteria Bacteria 44.7 0.0112   NR MDA9951656.1 2957744 g65604 i0 51.3 0.399317406143345 39 18 39.9 1 230 114 192 229 MDA9951656.1 SDR family NAD(P)-dependent oxidoreductase [Oligoflexaceae bacterium] diamond 117 44.7 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Oligoflexales Oligoflexaceae   Oligoflexaceae bacterium
28929035 28929035 PRJEB75230_P_NODE_183868_length_241_cov_0.916667_g183686_i0 PRJEB75230 183868 241 0.916667 2.20916747 Micavibrio aeruginosavorus 349221 Bacteria Bacteria 139 3.3999999999999996e-36   NR PZP57031.1 349221 g183686 i0 87.2 0.970954356846473 78 10 97.1 0 236 3 166 243 PZP57031.1 MAG: ribonuclease R [Micavibrio aeruginosavorus] diamond 234 139 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
29276194 29276194 PRJEB75230_P_NODE_146969_length_246_cov_1.734104_g146787_i0 PRJEB75230 146969 246 1.734104 4.26589584 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 44.7 0.00842   NR MDY0029759.1 2026715 g146787 i0 32.8 0.817073170731707 67 45 81.7 0 222 22 233 299 MDY0029759.1 double-strand break repair protein AddB [Pseudobdellovibrionaceae bacterium] diamond 201 44.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
29529030 29529030 PRJEB75230_P_NODE_107150_length_258_cov_1.378378_g106968_i0 PRJEB75230 107150 258 1.378378 3.5562152400000002 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 81.3 1.29e-15   NR MDX9730787.1 2053517 g106968 i0 56.7 1.04651162790698 90 32 96.5 1 258 10 834 923 MDX9730787.1 hypothetical protein [Bdellovibrionales bacterium] diamond 270 81.3 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29654817 29654817 PRJEB75230_P_NODE_166030_length_243_cov_1.429412_g165848_i0 PRJEB75230 166030 243 1.429412 3.47347116 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 68.6 2.6e-11   NR MBY0314892.1 2053517 g165848 i0 43.8 0.987654320987654 80 45 98.8 0 240 1 148 227 MBY0314892.1 hypothetical protein [Bdellovibrionales bacterium] diamond 240 68.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29869032 29869032 PRJEB75230_P_NODE_3571_length_719_cov_2.003096_g3399_i0 PRJEB75230 3571 719 2.003096 14.40226024 Pseudomonadati 3379134 Bacteria Bacteria 64.7 7.3900000000000007e-08   NR PIP93190.1 1975529 g3399 i0 35.4 2.94993045897079 127 66 50.5 4 143 505 864 980 PIP93190.1 MAG: hypothetical protein COW78_16385 [Bdellovibrio sp. CG22_combo_CG10-13_8_21_14_all_39_27] diamond 2121 65.1 0.993855606758833 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. CG22_combo_CG10-13_8_21_14_all_39_27
29971024 29971024 PRJEB75230_P_NODE_163091_length_244_cov_0.900585_g162909_i0 PRJEB75230 163091 244 0.900585 2.1974274 Bdellovibrio bacteriovorus 959 Bacteria Bacteria 61.6 7.36e-9   NR WP_061834842.1 959 g162909 i0 45.7 0.995901639344262 81 42 98.4 2 3 242 175 254 WP_061834842.1 hypothetical protein [Bdellovibrio bacteriovorus] diamond 243 61.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
30445120 30445120 PRJEB75230_P_NODE_170673_length_243_cov_0.905882_g170491_i0 PRJEB75230 170673 243 0.905882 2.20129326 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 47 0.00109   NR MBY0313984.1 2053517 g170491 i0 33.8 0.987654320987654 80 53 98.8 0 242 3 154 233 MBY0313984.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Bdellovibrionales bacterium] diamond 240 47 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30943352 30943352 PRJEB75230_P_NODE_101914_length_262_cov_1.222222_g101732_i0 PRJEB75230 101914 262 1.222222 3.20222164 Pseudomonadati 3379134 Bacteria Bacteria 53.1 8.28e-6   NR MBC7421275.1 28201 g101732 i0 47.2 2.40458015267176 53 28 60.7 0 165 7 137 189 MBC7421275.1 MOSC domain-containing protein [Bdellovibrio sp.] diamond 630 53.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
31424594 31424594 PRJEB75230_P_NODE_133456_length_249_cov_0.875000_g133274_i0 PRJEB75230 133456 249 0.875 2.17875 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 89 2.02e-18   NR MCB9073096.1 2026715 g133274 i0 56.1 1.95180722891566 82 35 97.6 1 2 244 334 415 MCB9073096.1 PAS domain-containing protein [Pseudobdellovibrionaceae bacterium] diamond 486 89 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
32500513 32500513 PRJEB75230_P_NODE_89379_length_272_cov_1.160804_g89197_i0 PRJEB75230 89379 272 1.160804 3.15738688 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 92 2.47e-19   NR MBX3041694.1 2026715 g89197 i0 47.2 1.96323529411765 89 47 98.2 0 270 4 566 654 MBX3041694.1 insulinase family protein [Pseudobdellovibrionaceae bacterium] diamond 534 92 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;