RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJEB75230", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 5 ✖

tax_clade 1

bioproject 1

  • PRJEB75230 · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2687901 2687901 PRJEB75230_P_NODE_80143_length_280_cov_0.956522_g79961_i0 PRJEB75230 80143 280 0.956522 2.6782616 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 66.2 3.17e-10   NR ETO01351.1 46433 g79961 i0 49.3 3.02142857142857 67 33 71.8 1 201 1 60 125 ETO01351.1 NADPH-cytochrome-P450 oxidoreductase [Reticulomyxa filosa] diamond 846 66.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
11616324 11616324 PRJEB75230_P_NODE_77850_length_281_cov_2.221154_g77668_i0 PRJEB75230 77850 281 2.221154 6.24144274 Alveolinella quoyi 128059 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|11932034|emb|AJ404294.1| 128059 g77668 i0 94.286 0.124555160142349 35 1 12 1 229 262 2440 2406 Alveolinella quoi 18S rRNA gene, isolate 300 blastn 35 52.8 1 Eukaryota Sar   Foraminifera   Miliolida Alveolinidae Alveolinella Alveolinella quoyi
15439263 15439263 PRJEB75230_P_NODE_185193_length_235_cov_2.283951_g185011_i0 PRJEB75230 185193 235 2.283951 5.36728485 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 109 9.2e-26   NR ETO05095.1 46433 g185011 i0 70.5 21.7021276595745 78 23 99.6 0 235 2 223 300 ETO05095.1 hypothetical protein RFI_32303 [Reticulomyxa filosa] diamond 5100 110 0.990909090909091 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30160381 30160381 PRJEB75230_P_NODE_80872_length_279_cov_1.121359_g80690_i0 PRJEB75230 80872 279 1.121359 3.12859161 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 122 3.19e-32   NR ETO00580.1 46433 g80690 i0 62.4 1 93 33 100 1 1 279 87 177 ETO00580.1 hypothetical protein RFI_36860 [Reticulomyxa filosa] diamond 279 122 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30792452 30792452 PRJEB75230_P_NODE_148194_length_246_cov_0.890173_g148012_i0 PRJEB75230 148194 246 0.890173 2.18982558 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 61.6 3.12e-9   NR ETO09282.1 46433 g148012 i0 42.3 1.68292682926829 71 36 86.6 1 30 242 1 66 ETO09282.1 oxidoreductase [Reticulomyxa filosa] diamond 414 61.6 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;