contig_metadata
5 rows where bioproject = "PRJEB75230", tax_clade = "Sar" and tax_phylum = "Endomyxa"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7788617 | 7788617 | PRJEB75230_P_NODE_140567_length_248_cov_0.811429_g140385_i0 | PRJEB75230 | 140567 | 248 | 0.811429 | 2.01234392 | Eukaryota | 2759 | SAR_Eukaryotes | SAR_Eukaryotes | 138 | 4.45e-40 | NR | CEO95284.1 | 37360 | g140385 | i0 | 81.5 | 178.33064516129 | 81 | 15 | 98 | 0 | 6 | 248 | 33 | 113 | CEO95284.1 hypothetical protein PBRA_004050 [Plasmodiophora brassicae] | diamond | 44226 | 139 | 0.992805755395683 | Eukaryota | Sar | Endomyxa | Phytomyxea | Plasmodiophorida | Plasmodiophoridae | Plasmodiophora | Plasmodiophora brassicae | ||
| 26781126 | 26781126 | PRJEB75230_P_NODE_134421_length_249_cov_0.875000_g134239_i0 | PRJEB75230 | 134421 | 249 | 0.875 | 2.17875 | Plasmodiophora brassicae | 37360 | SAR_Eukaryotes | SAR_Eukaryotes | 48.5 | 1.05e-4 | NR | CEO99711.1 | 37360 | g134239 | i0 | 88.5 | 0.313253012048193 | 26 | 3 | 31.3 | 0 | 123 | 46 | 109 | 134 | CEO99711.1 hypothetical protein PBRA_007444 [Plasmodiophora brassicae] | diamond | 78 | 48.5 | 1 | Eukaryota | Sar | Endomyxa | Phytomyxea | Plasmodiophorida | Plasmodiophoridae | Plasmodiophora | Plasmodiophora brassicae | ||
| 28929036 | 28929036 | PRJEB75230_P_NODE_185048_length_236_cov_2.834356_g184866_i0 | PRJEB75230 | 185048 | 236 | 2.834356 | 6.68908016 | Plasmodiophora brassicae | 37360 | SAR_Eukaryotes | SAR_Eukaryotes | 108 | 6.38e-28 | NR | SPQ93437.1 | 37360 | g184866 | i0 | 62.8 | 3.95338983050847 | 78 | 27 | 99.2 | 1 | 1 | 234 | 32 | 107 | SPQ93437.1 unnamed protein product [Plasmodiophora brassicae] | diamond | 933 | 108 | 1 | Eukaryota | Sar | Endomyxa | Phytomyxea | Plasmodiophorida | Plasmodiophoridae | Plasmodiophora | Plasmodiophora brassicae | ||
| 30950684 | 30950684 | PRJEB75230_P_NODE_18754_length_391_cov_0.968553_g18572_i0 | PRJEB75230 | 18754 | 391 | 0.968553 | 3.78704223 | Plasmodiophora brassicae | 37360 | SAR_Eukaryotes | SAR_Eukaryotes | 50.1 | 5.59e-4 | NR | SPQ96640.1 | 37360 | g18572 | i0 | 29 | 1.05882352941176 | 138 | 73 | 94.4 | 5 | 8 | 376 | 1371 | 1498 | SPQ96640.1 unnamed protein product [Plasmodiophora brassicae] | diamond | 414 | 50.1 | 1 | Eukaryota | Sar | Endomyxa | Phytomyxea | Plasmodiophorida | Plasmodiophoridae | Plasmodiophora | Plasmodiophora brassicae | ||
| 32657709 | 32657709 | PRJEB75230_P_NODE_50560_length_311_cov_1.483193_g50378_i0 | PRJEB75230 | 50560 | 311 | 1.483193 | 4.61273023 | Plasmodiophora brassicae | 37360 | SAR_Eukaryotes | SAR_Eukaryotes | 66.2 | 3.61e-10 | NR | SPQ94171.1 | 37360 | g50378 | i0 | 44.2 | 1.48553054662379 | 77 | 43 | 74.3 | 0 | 236 | 6 | 157 | 233 | SPQ94171.1 unnamed protein product [Plasmodiophora brassicae] | diamond | 462 | 66.2 | 1 | Eukaryota | Sar | Endomyxa | Phytomyxea | Plasmodiophorida | Plasmodiophoridae | Plasmodiophora | Plasmodiophora brassicae |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;