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contig_metadata

3 rows where bioproject = "PRJEB75230" and tax_clade = "SAR202 cluster"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • SAR202 cluster · 3 ✖

bioproject 1

  • PRJEB75230 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12889311 12889311 PRJEB75230_P_NODE_103631_length_261_cov_1.170213_g103449_i0 PRJEB75230 103631 261 1.170213 3.05425593 SAR202 cluster bacterium 2030829 Bacteria Bacteria 109 1.05e-26   NR MBM3946347.1 2030829 g103449 i0 58.5 2.85057471264368 82 33 94.3 1 248 3 90 170 MBM3946347.1 alpha/beta hydrolase [SAR202 cluster bacterium] diamond 744 109 1 Bacteria SAR202 cluster Bacillati Chloroflexota Dehalococcoidia       SAR202 cluster bacterium
26622618 26622618 PRJEB75230_P_NODE_75261_length_284_cov_1.094787_g75079_i0 PRJEB75230 75261 284 1.094787 3.10919508 SAR202 cluster bacterium 2030829 Bacteria Bacteria 43.1 0.0427   NR MDP6715894.1 2030829 g75079 i0 43.5 1.45774647887324 69 30 64.4 2 184 2 43 110 MDP6715894.1 PKD domain-containing protein [SAR202 cluster bacterium] diamond 414 43.1 1 Bacteria SAR202 cluster Bacillati Chloroflexota Dehalococcoidia       SAR202 cluster bacterium
29584533 29584533 PRJEB75230_P_NODE_29010_length_352_cov_1.103943_g28828_i0 PRJEB75230 29010 352 1.103943 3.88587936 Bacteria 2 Bacteria Bacteria 77 1.21e-13   NR MDP6452735.1 2030829 g28828 i0 46 2.80397727272727 113 55 93.8 4 332 3 197 306 MDP6452735.1 PKD domain-containing protein [SAR202 cluster bacterium] diamond 987 77 1 Bacteria SAR202 cluster Bacillati Chloroflexota Dehalococcoidia       SAR202 cluster bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;