RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB75230", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJEB75230 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1411420 1411420 PRJEB75230_P_NODE_185222_length_235_cov_2.018519_g185040_i0 PRJEB75230 185222 235 2.018519 4.74351965 uncultured Lentisphaeria bacterium 1506601 Bacteria Bacteria 259 1.16e-64   NTclustered gi|2518551196|emb|OX638337.1| 1506601 g185040 i0 93.642 2.11063829787234 173 11 74 0 1 173 647354 647182 MAG: uncultured Lentisphaeria bacterium isolate c31e16b5-b392-4df5-8896-43fa5ca65f34 genome assembly, chromosome: 1 blastn 496 259 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       uncultured Lentisphaeria bacterium
7373789 7373789 PRJEB75230_P_NODE_7906_length_512_cov_1.485194_g7724_i0 PRJEB75230 7906 512 1.485194 7.60419328 Lentisphaeraceae bacterium 2461380 Bacteria Bacteria 113 8.34e-26   NR MCM8540544.1 2461380 g7724 i0 36.5 4.9921875 170 102 97.3 3 14 511 269 436 MCM8540544.1 hypothetical protein [Lentisphaeraceae bacterium] diamond 2556 113 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Lentisphaerales Lentisphaeraceae   Lentisphaeraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;