RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB75230", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 4 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 4 ✖

bioproject 1

  • PRJEB75230 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26622592 26622592 PRJEB75230_P_NODE_17241_length_399_cov_1.616564_g17059_i0 PRJEB75230 17241 399 1.616564 6.45009036 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 84.3 9.75e-19   NR MFA7334868.1 2212473 g17059 i0 56.9 0.43609022556390997 58 25 43.6 0 131 304 1 58 MFA7334868.1 hypothetical protein [Kiritimatiellia bacterium] diamond 174 84.3 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
27413747 27413747 PRJEB75230_P_NODE_80883_length_279_cov_1.121359_g80701_i0 PRJEB75230 80883 279 1.121359 3.12859161 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 43.1 0.0438   NR MBR3777330.1 2212473 g80701 i0 36.1 0.655913978494624 61 38 64.5 1 192 13 748 808 MBR3777330.1 N-6 DNA methylase [Kiritimatiellia bacterium] diamond 183 43.1 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
28834266 28834266 PRJEB75230_P_NODE_133348_length_249_cov_0.875000_g133166_i0 PRJEB75230 133348 249 0.875 2.17875 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 53.9 1.38e-7   NR MBQ1428070.1 2212473 g133166 i0 42.9 1.24096385542169 49 28 59 0 192 46 2 50 MBQ1428070.1 hypothetical protein [Kiritimatiellia bacterium] diamond 309 53.9 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
28929023 28929023 PRJEB75230_P_NODE_107788_length_258_cov_1.178378_g107606_i0 PRJEB75230 107788 258 1.178378 3.04021524 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 45.1 0.00553   NR MDD6031479.1 2212473 g107606 i0 34.2 0.883720930232558 76 32 87.2 2 21 245 32 90 MDD6031479.1 alpha/beta fold hydrolase [Kiritimatiellia bacterium] diamond 228 45.1 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;