RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB75230", tax_clade = "Opisthokonta" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJEB75230 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22673067 22673067 PRJEB75230_P_NODE_5038_length_615_cov_1.177122_g4857_i0 PRJEB75230 5038 615 1.177122 7.2393003 Olpidium bornovanus 278681 Fungi Fungi 63.9 4.14e-8   NR KAG5455635.1 278681 g4857 i0 27.9 0.980487804878049 201 127 92.7 7 599 30 155 348 KAG5455635.1 MAG: Metalloenzyme, LuxS/M16 peptidase-like protein, partial [Olpidium bornovanus] diamond 603 63.9 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
29591673 29591673 PRJEB75230_P_NODE_108570_length_257_cov_1.347826_g108388_i0 PRJEB75230 108570 257 1.347826 3.46391282 Olpidium bornovanus 278681 Fungi Fungi 56.2 4.67e-8   NR KAG5462883.1 278681 g108388 i0 85.7 1.43579766536965 28 4 32.7 0 85 2 39 66 KAG5462883.1 MAG: hypothetical protein BJ554DRAFT_3049, partial [Olpidium bornovanus] diamond 369 56.2 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;