RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB75230", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJEB75230 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27160366 27160366 PRJEB75230_P_NODE_65722_length_293_cov_1.290909_g65540_i0 PRJEB75230 65722 293 1.290909 3.78236337 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 43.9 0.027   NR NLV43866.1 2030809 g65540 i0 36.2 0.706484641638225 69 40 69.6 3 214 11 9 74 NLV43866.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 207 43.9 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28234130 28234130 PRJEB75230_P_NODE_166446_length_243_cov_1.358824_g166264_i0 PRJEB75230 166446 243 1.358824 3.30194232 Candidatus Abyssobacteria bacterium SURF_17 2093361 Bacteria Bacteria 42.7 0.0361   NR RJP69522.1 2093361 g166264 i0 45.6 0.703703703703704 57 21 58 2 231 91 164 220 RJP69522.1 MAG: alpha/beta fold hydrolase [Candidatus Abyssobacteria bacterium SURF_17] diamond 171 42.7 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota Candidatus Abyssobacteria       Candidatus Abyssobacteria bacterium SURF_17
29433885 29433885 PRJEB75230_P_NODE_118230_length_251_cov_0.865169_g118048_i0 PRJEB75230 118230 251 0.865169 2.17157419 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 42.7 0.0408   NR NUM54948.1 2030809 g118048 i0 36.4 0.657370517928287 55 32 62.2 1 19 174 9 63 NUM54948.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 165 42.7 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;