RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB75230", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJEB75230 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1412568 1412568 PRJEB75230_P_NODE_91442_length_270_cov_1.538071_g91260_i0 PRJEB75230 91442 270 1.538071 4.1527917 Candidatus Minimicrobia sp. QA0096 3118470 Bacteria Bacteria 436 5.8499999999999985e-118   NTclustered gi|2686255593|emb|OZ017288.1| 3118470 g91260 i0 95.911 199.074074074074 269 11 99 0 2 270 635512 635244 Candidatus Minimicrobia sp. QA0096 genome assembly, chromosome: contig00001 blastn 53750 436 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota       Candidatus Minimicrobia Candidatus Minimicrobia sp. QA0096
28581877 28581877 PRJEB75230_P_NODE_44087_length_321_cov_1.241935_g43905_i0 PRJEB75230 44087 321 1.241935 3.98661135 Candidatus Saccharimonas sp. 1917697 Bacteria Bacteria 43.5 0.0457   NR RKV98530.1 1917697 g43905 i0 48.6 0.345794392523364 37 18 34.6 1 152 42 310 345 RKV98530.1 MAG: site-specific DNA-methyltransferase, partial [Candidatus Saccharimonas sp.] diamond 111 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas sp.
32247527 32247527 PRJEB75230_P_NODE_88338_length_273_cov_1.130000_g88156_i0 PRJEB75230 88338 273 1.13 3.0849 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 42.7 0.046   NR HET9411976.1 2973664 g88156 i0 35.6 0.648351648351648 59 38 64.8 0 268 92 56 114 HET9411976.1 CHAP domain-containing protein [Candidatus Saccharimonadales bacterium] diamond 177 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;