contig_metadata
6 rows where bioproject = "PRJEB75227" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6513759 | 6513759 | PRJEB75227_P_NODE_4506_length_335_cov_0.893130_g4335_i0 | PRJEB75227 | 4506 | 335 | 0.89313 | 2.9919855 | Candidatus Xiphinematobacter sp. Idaho Grape | 1704307 | Bacteria | Bacteria | 446 | 1.24e-120 | NTclustered | gi|939198278|gb|CP012665.1| | 1704307 | g4335 | i0 | 91.212 | 114.388059701493 | 330 | 26 | 98 | 3 | 8 | 335 | 15771 | 15443 | Candidatus Xiphinematobacter sp. Idaho Grape, complete genome | blastn | 38320 | 446 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Candidatus Xiphinematobacter | Candidatus Xiphinematobacter sp. Idaho Grape | |||
| 26781109 | 26781109 | PRJEB75227_P_NODE_10801_length_245_cov_0.906977_g10630_i0 | PRJEB75227 | 10801 | 245 | 0.906977 | 2.22209365 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 125 | 3.22e-32 | NR | HZO83750.1 | 2499141 | g10630 | i0 | 100 | 0.783673469387755 | 64 | 0 | 78.4 | 0 | 245 | 54 | 321 | 384 | HZO83750.1 tetratricopeptide repeat protein [Verrucomicrobiia bacterium] | diamond | 192 | 125 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 27287037 | 27287037 | PRJEB75227_P_NODE_8303_length_253_cov_0.866667_g8132_i0 | PRJEB75227 | 8303 | 253 | 0.866667 | 2.19266751 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 135 | 1.27e-36 | NR | NBR86461.1 | 2026799 | g8132 | i0 | 97.1 | 0.806324110671937 | 68 | 2 | 80.6 | 0 | 206 | 3 | 12 | 79 | NBR86461.1 ketoacyl-ACP synthase III [Verrucomicrobiota bacterium] | diamond | 204 | 135 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 28581847 | 28581847 | PRJEB75227_P_NODE_6147_length_285_cov_1.193396_g5976_i0 | PRJEB75227 | 6147 | 285 | 1.193396 | 3.4011786 | Opitutia bacterium | 2026771 | Bacteria | Bacteria | 53.1 | 1.29e-5 | NR | MBI2518388.1 | 2026771 | g5976 | i0 | 57.7 | 0.547368421052632 | 52 | 19 | 53.7 | 2 | 133 | 285 | 6 | 55 | MBI2518388.1 hypothetical protein [Opitutia bacterium] | diamond | 156 | 53.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutia bacterium | ||||
| 30887290 | 30887290 | PRJEB75227_P_NODE_8294_length_253_cov_0.866667_g8123_i0 | PRJEB75227 | 8294 | 253 | 0.866667 | 2.19266751 | Opitutaceae bacterium | 2006848 | Bacteria | Bacteria | 120 | 7.989999999999999e-30 | NR | MBL9187044.1 | 2006848 | g8123 | i0 | 66.3 | 3.93675889328063 | 83 | 28 | 98.4 | 0 | 251 | 3 | 169 | 251 | MBL9187044.1 sulfatase-like hydrolase/transferase [Opitutaceae bacterium] | diamond | 996 | 120 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium | ||
| 30950651 | 30950651 | PRJEB75227_P_NODE_10314_length_246_cov_0.901734_g10143_i0 | PRJEB75227 | 10314 | 246 | 0.901734 | 2.21826564 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 94.4 | 3.410000000000001e-21 | NR | RYD69104.1 | 2026800 | g10143 | i0 | 60 | 0.975609756097561 | 80 | 30 | 97.6 | 1 | 6 | 245 | 1 | 78 | RYD69104.1 MAG: MFS transporter, partial [Verrucomicrobiaceae bacterium] | diamond | 240 | 94.4 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;