RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJEB75227", tax_phylum = "Chloroflexota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 10 ✖

tax_phylum 1

  • Chloroflexota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJEB75227 · 10 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12889212 12889212 PRJEB75227_P_NODE_6471_length_280_cov_1.507246_g6300_i0 PRJEB75227 6471 280 1.507246 4.2202888 Anaerolineales bacterium 2073117 Bacteria Bacteria 411 3.6999999999999996e-110   NTclustered gi|2556906889|gb|CP129483.1| 2073117 g6300 i0 93.19 3.00357142857143 279 19 99 0 1 279 801803 801525 MAG: Anaerolineales bacterium isolate cMAG.13 chromosome, complete genome blastn 841 411 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
27255371 27255371 PRJEB75227_P_NODE_6123_length_285_cov_1.466981_g5952_i0 PRJEB75227 6123 285 1.466981 4.18089585 Chloroflexota bacterium 2026724 Bacteria Bacteria 142 4e-38   NR HEY1294518.1 2026724 g5952 i0 74.5 0.989473684210526 94 24 98.9 0 3 284 208 301 HEY1294518.1 phage tail sheath subtilisin-like domain-containing protein [Chloroflexota bacterium] diamond 282 142 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29332244 29332244 PRJEB75227_P_NODE_8989_length_251_cov_0.876404_g8818_i0 PRJEB75227 8989 251 0.876404 2.19977404 Bacteria 2 Bacteria Bacteria 134 1.12e-36   NR MEO8391633.1 2026724 g8818 i0 91.2 1.62549800796813 68 6 81.3 0 3 206 225 292 MEO8391633.1 carbohydrate ABC transporter permease [Chloroflexota bacterium] diamond 408 134 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
29781469 29781469 PRJEB75227_P_NODE_10031_length_247_cov_0.896552_g9860_i0 PRJEB75227 10031 247 0.896552 2.21448344 Anaerolineae bacterium 2052143 Bacteria Bacteria 49.3 3.95e-5   NR MCU0520643.1 2052143 g9860 i0 66.7 0.40080971659919 33 11 40.1 0 101 3 77 109 MCU0520643.1 hypothetical protein [Anaerolineae bacterium] diamond 99 49.3 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
30002762 30002762 PRJEB75227_P_NODE_8711_length_251_cov_1.752809_g8540_i0 PRJEB75227 8711 251 1.752809 4.39955059 Anaerolineae bacterium 2052143 Bacteria Bacteria 95.1 1.5e-20   NR MCL6509831.1 2052143 g8540 i0 60.2 0.99203187250996006 83 31 99.2 1 2 250 434 514 MCL6509831.1 ssDNA-binding domain-containing protein [Anaerolineae bacterium] diamond 249 95.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
30128667 30128667 PRJEB75227_P_NODE_6592_length_278_cov_1.521951_g6421_i0 PRJEB75227 6592 278 1.521951 4.23102378 Chloroflexota bacterium 2026724 Bacteria Bacteria 42.7 0.00552   NR MBA3689745.1 2026724 g6421 i0 39.1 0.690647482014389 64 25 68 3 249 61 6 56 MBA3689745.1 hypothetical protein [Chloroflexota bacterium] diamond 192 42.7 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30666036 30666036 PRJEB75227_P_NODE_5033_length_313_cov_0.975000_g4862_i0 PRJEB75227 5033 313 0.975 3.05175 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 72.8 2.28e-12   NR RJP54163.1 2024896 g4862 i0 37.9 2.95207667731629 103 64 98.7 0 311 3 409 511 RJP54163.1 MAG: hypothetical protein C4583_03270 [Anaerolineaceae bacterium] diamond 924 72.8 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
31298056 31298056 PRJEB75227_P_NODE_10775_length_245_cov_0.906977_g10604_i0 PRJEB75227 10775 245 0.906977 2.22209365 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 165 2.69e-46   NR HQL92072.1 2024896 g10604 i0 100 0.991836734693878 81 0 99.2 0 2 244 28 108 HQL92072.1 hypothetical protein [Anaerolineaceae bacterium] diamond 243 165 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
31645881 31645881 PRJEB75227_P_NODE_9877_length_248_cov_0.891429_g9706_i0 PRJEB75227 9877 248 0.891429 2.21074392 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 76.3 6.18e-14   NR HHV06124.1 2024896 g9706 i0 100 0.471774193548387 39 0 47.2 0 119 3 1 39 HHV06124.1 hypothetical protein [Anaerolineaceae bacterium] diamond 117 76.3 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
31962323 31962323 PRJEB75227_P_NODE_11838_length_242_cov_0.923077_g11667_i0 PRJEB75227 11838 242 0.923077 2.23384634 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 42.7 0.00984   NR MCL4230916.1 2026734 g11667 i0 30 0.867768595041322 70 45 81.8 1 3 200 33 102 MCL4230916.1 hypothetical protein [Dehalococcoidia bacterium] diamond 210 42.7 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;