RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB75227" and tax_phylum = "Annelida"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB75227 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21812446 21812446 PRJEB75227_P_NODE_6678_length_277_cov_1.450980_g6507_i0 PRJEB75227 6678 277 1.45098 4.0192146 Ailoscolex lacteospumosus 1046305 Annelida Annelida 52.8 0.025   NTclustered gi|2920003527|emb|OZ238867.1| 1046305 g6507 i0 100 0.101083032490975 28 0 10 0 45 72 1752847 1752820 Ailoscolex lacteospumosus genome assembly, chromosome: 8 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus
23948133 23948133 PRJEB75227_P_NODE_10959_length_244_cov_1.368421_g10788_i0 PRJEB75227 10959 244 1.368421 3.33894724 Clitellata 42113 Annelida Annelida 62.1 3.66e-5   NTclustered gi|675876331|ref|XM_009025478.1| 6412 g10788 i0 94.872 12.4385245901639 39 2 17 0 74 112 870 908 Helobdella robusta hypothetical protein partial mRNA blastn 3035 62.1 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Rhynchobdellida Glossiphoniidae Helobdella Helobdella robusta
28834251 28834251 PRJEB75227_P_NODE_11768_length_242_cov_0.923077_g11597_i0 PRJEB75227 11768 242 0.923077 2.23384634 Paralvinella palmiformis 53620 Annelida Annelida 48.1 4.74e-4   NR KAK2166337.1 53620 g11597 i0 35.8 0.830578512396694 67 41 80.6 1 216 22 1028 1094 KAK2166337.1 hypothetical protein LSH36_40g20008 [Paralvinella palmiformis] diamond 201 48.1 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;