RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJEB75227" and tax_clade = "Metamonada"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Metamonada · 5 ✖

bioproject 1

  • PRJEB75227 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28739595 28739595 PRJEB75227_P_NODE_9907_length_248_cov_0.891429_g9736_i0 PRJEB75227 9907 248 0.891429 2.21074392 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 45.8 0.00327   NR KAJ4462215.1 342808 g9736 i0 36.1 1.71774193548387 72 42 82.3 1 214 11 301 372 KAJ4462215.1 putative ankyrin repeat protein [Paratrimastix pyriformis] diamond 426 45.8 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
29907994 29907994 PRJEB75227_P_NODE_10131_length_247_cov_0.896552_g9960_i0 PRJEB75227 10131 247 0.896552 2.21448344 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 44.7 0.00797   NR KAJ6235743.1 1746091 g9960 i0 39.2 1.44534412955466 51 30 61.9 1 161 9 199 248 KAJ6235743.1 hypothetical protein M0813_28576 [Anaeramoeba flamelloides] diamond 357 44.7 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
31424581 31424581 PRJEB75227_P_NODE_10556_length_246_cov_0.901734_g10385_i0 PRJEB75227 10556 246 0.901734 2.21826564 Spironucleus salmonicida 348837 Fornicata other_Eukaryota 44.3 0.0109   NR XP_067764289.1 348837 g10385 i0 36.1 1.69512195121951 72 45 86.6 1 215 3 343 414 XP_067764289.1 Ubiquitin-protein ligase [Spironucleus salmonicida] diamond 417 44.3 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Spironucleus Spironucleus salmonicida
31551396 31551396 PRJEB75227_P_NODE_4276_length_344_cov_1.151292_g4105_i0 PRJEB75227 4276 344 1.151292 3.96044448 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 65.5 1.35e-9   NR XP_001322651.1 412133 g4105 i0 58.2 1.00290697674419 55 23 48 0 80 244 2133 2187 XP_001322651.1 ataxia telangiectasia mutated (ATM) -related family [Trichomonas vaginalis G3] diamond 345 65.5 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32532118 32532118 PRJEB75227_P_NODE_6699_length_277_cov_0.970588_g6528_i0 PRJEB75227 6699 277 0.970588 2.68852876 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 80.1 6.2e-16   NR KAJ5074052.1 1746090 g6528 i0 45.2 0.909747292418773 84 45 91 1 22 273 121 203 KAJ5074052.1 hypothetical protein M0811_00680 [Anaeramoeba ignava] diamond 252 80.1 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;