RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJEB75227", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 3 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 3 ✖

bioproject 1

  • PRJEB75227 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28139913 28139913 PRJEB75227_P_NODE_225_length_1556_cov_1.283884_g163_i0 PRJEB75227 225 1556 1.283884 19.97723504 Prymnesium parvum 97485 Haptophyta other_Eukaryota 115 1.06e-22   NR KAL1508137.1 97485 g163 i0 26.1 1.02570694087404 532 315 92.2 20 1508 75 1572 2079 KAL1508137.1 hypothetical protein AB1Y20_007724 [Prymnesium parvum] diamond 1596 115 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
29402588 29402588 PRJEB75227_P_NODE_10129_length_247_cov_0.896552_g9958_i0 PRJEB75227 10129 247 0.896552 2.21448344 Prymnesium parvum 97485 Haptophyta other_Eukaryota 78.2 1.3e-14   NR KAL1529557.1 97485 g9958 i0 42.7 3.94736842105263 82 46 99.6 1 2 247 371 451 KAL1529557.1 hypothetical protein AB1Y20_000501 [Prymnesium parvum] diamond 975 78.2 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
32342291 32342291 PRJEB75227_P_NODE_8199_length_253_cov_0.866667_g8028_i0 PRJEB75227 8199 253 0.866667 2.19266751 Prymnesium parvum 97485 Haptophyta other_Eukaryota 42.7 0.0402   NR KAL1524585.1 97485 g8028 i0 51.1 0.533596837944664 45 21 53.4 1 5 139 101 144 KAL1524585.1 hypothetical protein AB1Y20_019475 [Prymnesium parvum] diamond 135 42.7 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;