RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJEB75227", tax_clade = "Discoba" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 9 ✖

tax_clade 1

  • Discoba · 9 ✖

bioproject 1

  • PRJEB75227 · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9923681 9923681 PRJEB75227_P_NODE_11728_length_242_cov_0.923077_g11557_i0 PRJEB75227 11728 242 0.923077 2.23384634 Naegleria 5761 Heterolobosea other_Eukaryota 121 5.889999999999999e-23   NTclustered gi|2618963742|gb|OR769034.1| 5762 g11557 i0 88.119 36.0289256198347 101 12 42 0 1 101 5157 5057 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 8719 121 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16712374 16712374 PRJEB75227_P_NODE_9194_length_250_cov_0.881356_g9023_i0 PRJEB75227 9194 250 0.881356 2.20339 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 185 2.14e-42   NTclustered gi|2119435201|ref|XM_044703408.1| 5763 g9023 i0 80.08 73.448 251 48 100 2 1 250 85 334 Naegleria fowleri uncharacterized protein (FDP41_012844), partial mRNA blastn 18362 185 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
20536588 20536588 PRJEB75227_P_NODE_9137_length_250_cov_0.881356_g8966_i0 PRJEB75227 9137 250 0.881356 2.20339 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 113 6.57e-28   NR XP_044546376.1 51637 g8966 i0 67.1 2.952 82 26 98.4 1 249 4 129 209 XP_044546376.1 uncharacterized protein C9374_007752 [Naegleria lovaniensis] diamond 738 113 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
27318792 27318792 PRJEB75227_P_NODE_9383_length_249_cov_0.886364_g9212_i0 PRJEB75227 9383 249 0.886364 2.20704636 Acrasis kona 1008807 Heterolobosea other_Eukaryota 113 6.95e-29   NR KAL0481096.1 1008807 g9212 i0 60.2 1 83 30 96.4 1 242 3 5 87 KAL0481096.1 histidine triad nucleotide-binding protein [Acrasis kona] diamond 249 113 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
29181765 29181765 PRJEB75227_P_NODE_8149_length_253_cov_1.300000_g7978_i0 PRJEB75227 8149 253 1.3 3.289 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 43.9 0.0161   NR XP_002670672.1 5762 g7978 i0 45.5 0.652173913043478 55 25 59.3 3 5 154 52 106 XP_002670672.1 uncharacterized protein NAEGRDRAFT_74355 [Naegleria gruberi] diamond 165 43.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29616068 29616068 PRJEB75227_P_NODE_10390_length_246_cov_0.901734_g10219_i0 PRJEB75227 10390 246 0.901734 2.21826564 Naegleria 5761 Heterolobosea other_Eukaryota 77 2.98e-14   NR XP_002670254.1 5762 g10219 i0 47.6 3.07317073170732 84 42 100 2 1 246 250 333 XP_002670254.1 uncharacterized protein NAEGRDRAFT_81892 [Naegleria gruberi] diamond 756 77 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30634328 30634328 PRJEB75227_P_NODE_8193_length_253_cov_0.866667_g8022_i0 PRJEB75227 8193 253 0.866667 2.19266751 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 113 1.8000000000000002e-28   NR XP_044566228.1 5763 g8022 i0 67.9 3.8300395256917 81 25 96 1 6 248 189 268 XP_044566228.1 uncharacterized protein FDP41_012172 [Naegleria fowleri] diamond 969 113 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
30919074 30919074 PRJEB75227_P_NODE_10774_length_245_cov_0.906977_g10603_i0 PRJEB75227 10774 245 0.906977 2.22209365 Acrasis kona 1008807 Heterolobosea other_Eukaryota 105 3.02e-24   NR KAL0491958.1 1008807 g10603 i0 65.8 0.930612244897959 76 26 93.1 0 4 231 67 142 KAL0491958.1 regulator of G-protein signaling [Acrasis kona] diamond 228 105 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32120715 32120715 PRJEB75227_P_NODE_11118_length_244_cov_0.912281_g10947_i0 PRJEB75227 11118 244 0.912281 2.22596564 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 101 1.2199999999999999e-23   NR XP_002675129.1 5762 g10947 i0 57.3 1.00819672131148 82 34 99.6 1 244 2 112 193 XP_002675129.1 fibronectin, type-like protein [Naegleria gruberi] diamond 246 101 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;