RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB75017" and tax_phylum = "Lentisphaerota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJEB75017 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10338448 10338448 PRJEB75017_P_NODE_4189_length_428_cov_1.740845_g4060_i0 PRJEB75017 4189 428 1.740845 7.4508166 Victivallaceae bacterium 2793042 Bacteria Bacteria 167 1.4100000000000001e-36   NTclustered gi|2621704067|emb|OY761536.1| 2793042 g4060 i0 87.5 221.684579439252 144 18 34 0 232 375 1448355 1448212 MAG: Victivallaceae bacterium isolate e353ef71-700a-4510-b67c-5bed4426050c genome assembly, chromosome: 1 blastn 94881 167 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae   Victivallaceae bacterium
31234682 31234682 PRJEB75017_P_NODE_17375_length_244_cov_1.532164_g17246_i0 PRJEB75017 17375 244 1.532164 3.73848016 Victivallaceae bacterium 2793042 Bacteria Bacteria 76.3 1.2e-14   NR MCQ2379487.1 2793042 g17246 i0 51.3 0.959016393442623 78 38 95.9 0 241 8 40 117 MCQ2379487.1 ribonuclease HII [Victivallaceae bacterium] diamond 234 76.3 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales Victivallaceae   Victivallaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;