RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJEB75017" and tax_phylum = "Candidatus Magasanikiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Magasanikiibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJEB75017 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31108268 31108268 PRJEB75017_P_NODE_8335_length_312_cov_0.979079_g8206_i0 PRJEB75017 8335 312 0.979079 3.05472648 Candidatus Magasanikbacteria bacterium RIFOXYD2_FULL_36_9 1798707 Bacteria Bacteria 46.2 0.0027   NR OGH88571.1 1798707 g8206 i0 46.5 0.413461538461538 43 21 39.4 1 305 183 77 119 OGH88571.1 MAG: hypothetical protein A2537_00075 [Candidatus Magasanikbacteria bacterium RIFOXYD2_FULL_36_9] diamond 129 46.2 1 Bacteria Bacteria candidate phyla   Candidatus Magasanikiibacteriota         Candidatus Magasanikbacteria bacterium RIFOXYD2_FULL_36_9

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;