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contig_metadata

21 rows where bioproject = "PRJEB75017", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 21 ✖

tax_kingdom 1

  • Pseudomonadati · 21 ✖

bioproject 1

  • PRJEB75017 · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4823609 4823609 PRJEB75017_P_NODE_14324_length_252_cov_0.871508_g14195_i0 PRJEB75017 14324 252 0.871508 2.19620016 Pseudobdellovibrio 2862745 Bacteria Bacteria 422 1.51e-113   NTclustered gi|507148233|ref|NR_103040.1| 453816 g14195 i0 96.825 88.8174603174603 252 8 100 0 1 252 1553 1804 Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence blastn 22382 422 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Pseudobdellovibrio Pseudobdellovibrio exovorus
9923589 9923589 PRJEB75017_P_NODE_13488_length_255_cov_1.368132_g13359_i0 PRJEB75017 13488 255 1.368132 3.4887366 Bdellovibrio 958 Bacteria Bacteria 342 1.2299999999999997e-89   NTclustered gi|2800920897|gb|CP168968.1| 959 g13359 i0 93.833 81.4980392156863 227 14 89 0 16 242 1607718 1607492 Bdellovibrio bacteriovorus strain Bd5 chromosome, complete genome blastn 20782 342 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
20122094 20122094 PRJEB75017_P_NODE_7336_length_330_cov_1.214008_g7207_i0 PRJEB75017 7336 330 1.214008 4.0062264 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 191 3.8699999999999996e-60   NR MCB0369869.1 2053517 g7207 i0 85.3 1.98181818181818 109 16 99.1 0 328 2 7 115 MCB0369869.1 uL15 family ribosomal protein [Bdellovibrionales bacterium] diamond 654 191 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27192040 27192040 PRJEB75017_P_NODE_12722_length_262_cov_1.640212_g12593_i0 PRJEB75017 12722 262 1.640212 4.29735544 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 131 1.12e-37   NR MCB0368788.1 2053517 g12593 i0 69 0.961832061068702 84 26 96.2 0 10 261 1 84 MCB0368788.1 hypothetical protein [Bdellovibrionales bacterium] diamond 252 131 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27445287 27445287 PRJEB75017_P_NODE_2603_length_545_cov_1.332627_g2474_i0 PRJEB75017 2603 545 1.332627 7.26281715 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 92 4.7e-18   NR MBS1972054.1 2053517 g2474 i0 34.1 1.01834862385321 185 110 99.1 7 5 544 241 418 MBS1972054.1 hypothetical protein [Bdellovibrionales bacterium] diamond 555 92 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27603052 27603052 PRJEB75017_P_NODE_8704_length_306_cov_1.004292_g8575_i0 PRJEB75017 8704 306 1.004292 3.07313352 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 134 5.41e-39   NR MCB0368227.1 2053517 g8575 i0 88 0.735294117647059 75 9 73.5 0 27 251 1 75 MCB0368227.1 hypothetical protein [Bdellovibrionales bacterium] diamond 225 134 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
27824049 27824049 PRJEB75017_P_NODE_18104_length_243_cov_0.917647_g17975_i0 PRJEB75017 18104 243 0.917647 2.22988221 Bdellovibrio sp. KM 28201 Bacteria Bacteria 64.7 6.29e-10   NR WP_181604190.1 2748865 g17975 i0 39.8 1.02469135802469 83 46 97.5 2 3 239 29 111 WP_181604190.1 hypothetical protein [Bdellovibrio sp. KM01] diamond 249 64.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. KM01
28265729 28265729 PRJEB75017_P_NODE_17686_length_244_cov_0.912281_g17557_i0 PRJEB75017 17686 244 0.912281 2.22596564 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 145 9.44e-41   NR MCB0369784.1 2053517 g17557 i0 80.2 0.995901639344262 81 16 99.6 0 243 1 20 100 MCB0369784.1 insulinase family protein [Bdellovibrionales bacterium] diamond 243 145 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28518594 28518594 PRJEB75017_P_NODE_12767_length_262_cov_1.238095_g12638_i0 PRJEB75017 12767 262 1.238095 3.2438089 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 93.2 2.18e-22   NR MCB0368049.1 2053517 g12638 i0 71.2 0.755725190839695 66 19 75.6 0 29 226 42 107 MCB0368049.1 hypothetical protein [Bdellovibrionales bacterium] diamond 198 93.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
28708103 28708103 PRJEB75017_P_NODE_14087_length_252_cov_1.659218_g13958_i0 PRJEB75017 14087 252 1.659218 4.18122936 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 61.2 2.39e-10   NR MCB0370383.1 2053517 g13958 i0 50.8 0.702380952380952 59 28 69 1 177 4 1 59 MCB0370383.1 hypothetical protein [Bdellovibrionales bacterium] diamond 177 61.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
29907972 29907972 PRJEB75017_P_NODE_5471_length_376_cov_1.026403_g5342_i0 PRJEB75017 5471 376 1.026403 3.85927528 Halobacteriovorax sp. GB3 2719615 Bacteria Bacteria 44.7 0.0325   NR WP_273871301.1 2719615 g5342 i0 39.1 0.51063829787234 64 36 51.1 2 234 43 174 234 WP_273871301.1 GNAT family N-acetyltransferase [Halobacteriovorax sp. GB3] diamond 192 44.7 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Halobacteriovoraceae Halobacteriovorax Halobacteriovorax sp. GB3
29970989 29970989 PRJEB75017_P_NODE_9371_length_296_cov_1.399103_g9242_i0 PRJEB75017 9371 296 1.399103 4.14134488 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 153 3.63e-44   NR MCB0368225.1 2053517 g9242 i0 71.4 1.98648648648649 98 28 99.3 0 295 2 65 162 MCB0368225.1 HAD family hydrolase [Bdellovibrionales bacterium] diamond 588 153 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30192059 30192059 PRJEB75017_P_NODE_8532_length_308_cov_2.587234_g8403_i0 PRJEB75017 8532 308 2.587234 7.96868072 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 159 2.52e-48   NR MCB0371361.1 2053517 g8403 i0 83.1 0.866883116883117 89 15 86.7 0 39 305 7 95 MCB0371361.1 hypothetical protein [Bdellovibrionales bacterium] diamond 267 159 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
30413589 30413589 PRJEB75017_P_NODE_12253_length_267_cov_1.206186_g12124_i0 PRJEB75017 12253 267 1.206186 3.22051662 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 164 7.87e-50   NR MBP9675022.1 2081706 g12124 i0 90.9 0.98876404494382 88 8 98.9 0 2 265 26 113 MBP9675022.1 EF-hand domain-containing protein [Bacteriovoracaceae bacterium] diamond 264 164 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium
30855598 30855598 PRJEB75017_P_NODE_2214_length_586_cov_2.499025_g2086_i0 PRJEB75017 2214 586 2.499025 14.6442865 Pseudobdellovibrionaceae bacterium 2026715 Bacteria Bacteria 189 3.0299999999999997e-56   NR MBL7554791.1 2026715 g2086 i0 98.9 0.455631399317406 89 1 45.6 0 3 269 209 297 MBL7554791.1 hypothetical protein [Pseudobdellovibrionaceae bacterium] diamond 267 189 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae   Pseudobdellovibrionaceae bacterium
31013596 31013596 PRJEB75017_P_NODE_7795_length_321_cov_2.201613_g7666_i0 PRJEB75017 7795 321 2.201613 7.06717773 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 188 1.4899999999999995e-55   NR MCB0368368.1 2053517 g7666 i0 82.1 0.990654205607477 106 19 99.1 0 2 319 36 141 MCB0368368.1 hypothetical protein [Bdellovibrionales bacterium] diamond 318 188 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
31266509 31266509 PRJEB75017_P_NODE_8435_length_310_cov_1.578059_g8306_i0 PRJEB75017 8435 310 1.578059 4.8919829 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 154 1.27e-45   NR MCB0370127.1 2053517 g8306 i0 93.7 0.764516129032258 79 5 76.5 0 238 2 31 109 MCB0370127.1 40S ribosomal protein S14 [Bdellovibrionales bacterium] diamond 237 154 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32183912 32183912 PRJEB75017_P_NODE_13098_length_258_cov_2.508108_g12969_i0 PRJEB75017 13098 258 2.508108 6.47091864 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 164 1.03e-49   NR MCB0369646.1 2053517 g12969 i0 90.7 1 86 8 100 0 258 1 34 119 MCB0369646.1 50S ribosomal protein L22 [Bdellovibrionales bacterium] diamond 258 164 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32342274 32342274 PRJEB75017_P_NODE_8699_length_306_cov_1.004292_g8570_i0 PRJEB75017 8699 306 1.004292 3.07313352 Bdellovibrio sp. 28201 Bacteria Bacteria 98.6 1.5099999999999998e-23   NR MBC7742984.1 28201 g8570 i0 87.7 1.67647058823529 57 7 55.9 0 3 173 113 169 MBC7742984.1 OmpH family outer membrane protein [Bdellovibrio sp.] diamond 513 98.6 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp.
32626404 32626404 PRJEB75017_P_NODE_2160_length_593_cov_1.915385_g2033_i0 PRJEB75017 2160 593 1.915385 11.35823305 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 56.2 1.85e-5   NR MCB0368268.1 2053517 g2033 i0 23.9 2.0893760539629 213 112 95.6 7 20 586 1 187 MCB0368268.1 DUF4215 domain-containing protein [Bdellovibrionales bacterium] diamond 1239 56.2 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32720988 32720988 PRJEB75017_P_NODE_11480_length_274_cov_3.114428_g11351_i0 PRJEB75017 11480 274 3.114428 8.53353272 Bacteriovoracaceae bacterium 2081706 Bacteria Bacteria 145 4.839999999999999e-42   NR MBP9675022.1 2081706 g11351 i0 87.7 0.886861313868613 81 10 88.7 0 245 3 6 86 MBP9675022.1 EF-hand domain-containing protein [Bacteriovoracaceae bacterium] diamond 243 145 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae   Bacteriovoracaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;