RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJEB75017", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

  • Methanobacteriati · 2 ✖

bioproject 1

  • PRJEB75017 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26868915 26868915 PRJEB75017_P_NODE_9261_length_298_cov_1.040000_g9132_i0 PRJEB75017 9261 298 1.04 3.0992 root 1 Root_unresolved Root_unresolved 45.8 0.00436   NR MCK4948533.1 1906666 g9132 i0 38.7 1.28859060402685 62 38 62.4 0 194 9 63 124 MCK4948533.1 heme ABC exporter ATP-binding protein CcmA [Thermoplasmata archaeon] diamond 384 45.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
27508316 27508316 PRJEB75017_P_NODE_13323_length_256_cov_1.989071_g13194_i0 PRJEB75017 13323 256 1.989071 5.09202176 Thermoplasmatota archaeon 2806419 Archaea Archaea 94.7 1.88e-20   NR HET6405799.1 2806419 g13194 i0 55.4 0.97265625 83 37 97.3 0 251 3 1 83 HET6405799.1 malate synthase A [Thermoplasmatota archaeon] diamond 249 94.7 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;