RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJEB75017", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 6 ✖

tax_kingdom 1

  • Fungi · 6 ✖

tax_clade 1

bioproject 1

  • PRJEB75017 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15437798 15437798 PRJEB75017_P_NODE_11333_length_276_cov_1.192118_g11204_i0 PRJEB75017 11333 276 1.192118 3.29024568 Coelomomyces lativittatus 945690 Fungi Fungi 117 2.0299999999999997e-31   NR KAJ1509529.1 945690 g11204 i0 62.5 39.3804347826087 88 33 95.7 0 268 5 1 88 KAJ1509529.1 60S ribosomal protein L32 [Coelomomyces lativittatus] diamond 10869 117 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
15437835 15437835 PRJEB75017_P_NODE_16533_length_246_cov_1.352601_g16404_i0 PRJEB75017 16533 246 1.352601 3.32739846 Eukaryota 2759 Fungi Fungi 99.8 3.46e-22   NR KAI9168454.1 1313167 g16404 i0 55.7 8.71951219512195 79 35 96.3 0 1 237 470 548 KAI9168454.1 succinate dehydrogenase flavoprotein subunit [Blastocladiella emersonii ATCC 22665] diamond 2145 99.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
27223585 27223585 PRJEB75017_P_NODE_12883_length_261_cov_1.239362_g12754_i0 PRJEB75017 12883 261 1.239362 3.23473482 Blastocladiella britannica 64508 Fungi Fungi 85.1 4.58e-17   NR KAI9219086.1 64508 g12754 i0 51.8 11 85 36 92 2 17 256 1 85 KAI9219086.1 hypothetical protein BC828DRAFT_386956 [Blastocladiella britannica] diamond 2871 85.1 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
30280121 30280121 PRJEB75017_P_NODE_13852_length_253_cov_0.866667_g13723_i0 PRJEB75017 13852 253 0.866667 2.19266751 root 1 Root_unresolved Root_unresolved 50.8 6.03e-5   NR KAJ3369523.1 64504 g13723 i0 46.6 4.05533596837945 58 31 68.8 0 178 5 276 333 KAJ3369523.1 hypothetical protein GGF31_005233 [Allomyces arbusculus] diamond 1026 50.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
30848448 30848448 PRJEB75017_P_NODE_11074_length_278_cov_2.165854_g10945_i0 PRJEB75017 11074 278 2.165854 6.02107412 Allomyces 28581 Fungi Fungi 48.9 3.77e-4   NR KAJ3374655.1 64504 g10945 i0 40.9 1.42446043165468 66 38 71.2 1 200 3 37 101 KAJ3374655.1 hypothetical protein GGF31_006552 [Allomyces arbusculus] diamond 396 48.9 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
32563777 32563777 PRJEB75017_P_NODE_5519_length_374_cov_1.554817_g5390_i0 PRJEB75017 5519 374 1.554817 5.81501558 Paraphysoderma sedebokerense 1500003 Fungi Fungi 65.1 3.7e-10   NR KAI9136487.1 1500003 g5390 i0 45.1 0.56951871657754 71 36 57 1 374 162 107 174 KAI9136487.1 cyclophilin-like domain-containing protein, partial [Paraphysoderma sedebokerense] diamond 213 65.1 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;