RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJEB75017", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJEB75017 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7787760 7787760 PRJEB75017_P_NODE_2607_length_544_cov_195.477707_g2478_i0 PRJEB75017 2607 544 195.477707 1063.39872608 Amorphochlora amoebiformis 1561963 SAR_Eukaryotes SAR_Eukaryotes 73.1 4.11e-8   NTclustered gi|893150443|dbj|AB996604.1| 1561963 g2478 i0 80.18 9.78860294117647 111 10 20 11 437 544 766 867 Amorphochlora amoebiformis nucleomorph DNA, chromosome: 3, complete sequence, strain: CCMP2058 blastn 5325 73.1 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Amorphochlora Amorphochlora amoebiformis
9062695 9062695 PRJEB75017_P_NODE_6988_length_337_cov_2.678030_g6859_i0 PRJEB75017 6988 337 2.67803 9.0249611 Bodomorpha sp. HFCC 92 458884 SAR_Eukaryotes SAR_Eukaryotes 496 1.22e-135   NTclustered gi|197723521|gb|EF681900.2| 458884 g6859 i0 100 99.8456973293769 268 0 80 0 1 268 268 1 Bodomorpha sp. HFCC 92 28S ribosomal RNA gene, partial sequence blastn 33648 496 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC 92
17986980 17986980 PRJEB75017_P_NODE_4615_length_407_cov_3.314371_g4486_i0 PRJEB75017 4615 407 3.314371 13.48948997 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 278 5.920000000000001e-70   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g4486 i0 81.081 35.3562653562654 370 51 90 11 1 368 3669 4021 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 14390 278 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
19260985 19260985 PRJEB75017_P_NODE_4736_length_403_cov_6.466667_g4607_i0 PRJEB75017 4736 403 6.466667 26.06066801 Bodomorpha sp. HFCC 92 458884 SAR_Eukaryotes SAR_Eukaryotes 745 0   NTclustered gi|197723521|gb|EF681900.2| 458884 g4607 i0 100 9.35732009925558 403 0 100 0 1 403 305 707 Bodomorpha sp. HFCC 92 28S ribosomal RNA gene, partial sequence blastn 3771 745 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC 92
19261001 19261001 PRJEB75017_P_NODE_7736_length_322_cov_1.879518_g7607_i0 PRJEB75017 7736 322 1.879518 6.05204796 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 436 7.139999999999999e-118   NTclustered gi|238617602|gb|FJ973377.1| 188950 g7607 i0 91.131 99.3850931677019 327 21 100 8 1 322 2689 3012 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 32002 436 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
28858495 28858495 PRJEB75017_P_NODE_17708_length_244_cov_0.912281_g17579_i0 PRJEB75017 17708 244 0.912281 2.22596564 root 1 Root_unresolved Root_unresolved 110 2.36e-27   NR MES1911029.1 1215613 g17579 i0 66.3 1.77049180327869 80 27 98.4 0 2 241 105 184 MES1911029.1 hypothetical protein [Cercozoa sp. M6MM] diamond 432 110 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM
30287351 30287351 PRJEB75017_P_NODE_16612_length_246_cov_0.901734_g16483_i0 PRJEB75017 16612 246 0.901734 2.21826564 Cercozoa sp. M6MM 1215613 SAR_Eukaryotes SAR_Eukaryotes 70.5 4.61e-12   NR MES1908091.1 1215613 g16483 i0 36 2.68292682926829 75 46 91.5 1 20 244 17 89 MES1908091.1 hypothetical protein [Cercozoa sp. M6MM] diamond 660 70.5 1 Eukaryota Sar   Cercozoa         Cercozoa sp. M6MM

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;