RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJEB75017", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 4 ✖

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJEB75017 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27192062 27192062 PRJEB75017_P_NODE_9422_length_295_cov_1.873874_g9293_i0 PRJEB75017 9422 295 1.873874 5.5279283 Hexamita inflata 28002 Fornicata other_Eukaryota 81.3 2.04e-15   NR CAK8776449.1 28002 g9293 i0 50.6 1.73898305084746 87 41 86.4 1 33 287 1238 1324 CAK8776449.1 HINF_030216 [Hexamita inflata] diamond 513 81.3 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
29307817 29307817 PRJEB75017_P_NODE_7009_length_337_cov_1.367424_g6880_i0 PRJEB75017 7009 337 1.367424 4.60821888 Giardia intestinalis 5741 Fornicata other_Eukaryota 62.8 1.03e-8   NR XP_001708419.2 5741 g6880 i0 44.2 0.845697329376855 95 42 78.3 4 53 316 390 480 XP_001708419.2 High cysteine membrane protein Group 6 [Giardia intestinalis] diamond 285 62.8 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
29869020 29869020 PRJEB75017_P_NODE_4391_length_418_cov_1.652174_g4262_i0 PRJEB75017 4391 418 1.652174 6.90608732 Giardia 5740 Fornicata other_Eukaryota 45.4 0.024   NR ESU35860.1 5741 g4262 i0 53.8 0.559808612440191 39 17 28 1 394 278 347 384 ESU35860.1 Putative WD-repeat family protein, partial [Giardia intestinalis] diamond 234 45.4 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia duodenalis
32120689 32120689 PRJEB75017_P_NODE_14798_length_251_cov_0.876404_g14669_i0 PRJEB75017 14798 251 0.876404 2.19977404 Giardia muris 5742 Fornicata other_Eukaryota 55.1 1.81e-6   NR TNJ26465.1 5742 g14669 i0 51.2 1.44621513944223 43 19 49 1 123 1 414 456 TNJ26465.1 Ankyrin repeat protein 2 [Giardia muris] diamond 363 55.1 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;